Gavialis gangeticus (Gharial): 109303631
Help
Entry
109303631 CDS
T07453
Symbol
POLR1A
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
ggn
Gavialis gangeticus (Gharial)
Pathway
ggn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
ggn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
109303631 (POLR1A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ggn03021
]
109303631 (POLR1A)
Enzymes [BR:
ggn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
109303631 (POLR1A)
Transcription machinery [BR:
ggn03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
109303631 (POLR1A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
109303631
NCBI-ProteinID:
XP_019381374
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MALPREVPWRRLAGISFGMYTAEELRKLSVKAITNPRYLDNVGNPAANGLYDLSLGPPDS
REACTTCMQDFDSCPGHFGHIDLPLAVYNPLFFDKLYFLIRGSCLNCCLLTCTRAVVHLL
LSQLKVLERGLLHAVYDLEAVLNRFLDENADATGPEIEEELSRHVNEMLQNNQLGDQCSN
VKNVCECRSKLIAQFWKLHMTSKRCPNCKAKRSLVRKEHNSKLTVTYPTAVRQKSGKEAI
VEQPATIDESHMGKRGYMTPISAKEHVTALWKNEGFFLSHLFSGLEVGENSGFSPDMFFL
DLVMVPPSRYRPVNRLGDQMFTNGQTVNLQAVMKDVQMIRKLLAFMAQEQSQSIKIGENE
VQEEINEPLEPLDHSILATIPGQSTADKLYNIWVRLQSHVNIVFDSDMDKLISDKYPGIR
QILEKKEGLFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNIK
ELRQAVINGPSVHPGASMVINEDGSRTILSTTSQTQRESIAKQLLTPPTGAPKSAMKIVC
RHVKNGDVLLLNRQPTLHRPSIQAHRARILPGEKVLRLHYANCKAYNADFDGDEMNAHFP
QSELGRAEAYTLACTDEQYLVPKDGKPLAGLIQDHMISGASMTIRGCFFTREQYMELVYR
GLTDKKGRVKILPPAIMKPQQLWTGKQVVSTLLINVIPENHIPLNLSGKAQIGAKAWVKG
PVNRIPGLNLDSMCESQVVMREGELLCGVLDKAHYGSSAFGLVHCCYEVYGGETSGKVLT
CLARLFTAYLQLYRGFTMGVEDILVKPRADHKRGKIIEESTYCGTKAVRAAFNLPETTSH
EEVQGKWQDAHLCKDQRDFNMVDLKFKEEVNNYSNEVNKVCMPLGLHRSFPENNLQLMVQ
SGAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFQPYDFSPRSGGFVTGRFLTGI
KPAEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLY
GEDGLDIPKTPFLQPKQFPFIADNYEVIEKSKHLDEALSRMDPHQASQQFRAIKKWQAKH
QSSLAREGAFLLFTQKKMASLREQISEGETKNGRSPATQQLLSMWYELDEKKRRKYLKKT
SKCPDPSLAVWRPDIHFASISETFEVGVENYIREWEAQNNRNYVKSELSYDRLKNLLYLK
WQRSLCDPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASAKI
KTPMMSVPVLNTKKAQKRVKRLKKQLTRVYLADVLQNIKIDESLCIEGKQSKYRRYQIRF
HFLPYESYREEKCLKPRDILHFMETRLFKIMLETVKRKSTKMASFSAINTRKVTQKDLDG
DDGATQANQVQDDNEAEAEEGRPVDGEAEEGDADATDAKRKEKQEEEVDYESEEEVNEEN
GDENSEDEEGPLLDDKRAEESEEGSNVLCHEDDSQFSASSSLSKKEKTPKQNASVELRVS
SVVSSHPSIENYEYDVENELWCEVSLKLPLMKAYFDLSSFLESLMQNTVVHETKGITRCF
LNESTNKKGERELILNTEGINLSELFKYSDVLDLSRLYSNDIHAMAKTYGIEAALRVIEK
EIKDVFAVYGIVINPRHLSLVADYMCFEGVYKPLNRYGIQSSSSPLQQMTFETSYKFLKE
ATMMGAHDELRSPSACLVVGKVVKGGTGLFDLKQPLT
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atggcgctaccccgagaggtgccgtggcggcggttggccgggatctcgttcgggatgtac
acggccgaggagctcaggaaactaagtgtgaaggctatcaccaacccacgctacctggac
aacgtggggaatcccgccgccaacggtctctacgacctgtctctgggcccgccggactct
agagaagcctgtaccacttgcatgcaggacttcgacagctgcccggggcacttcggccac
atcgatctgccgctcgctgtctacaaccctctgttctttgataaattatactttctcatc
cgtggttcttgtttaaactgttgcttgctgacatgcacccgagcagtggttcacttacta
ctaagccagctgaaggtcctggagagagggttgcttcatgccgtttatgatcttgaagct
gtcctgaataggtttttagatgaaaatgcagatgcaactggtccagagattgaagaagaa
ttaagccgccacgtgaatgaaatgctacaaaacaaccagctaggagatcagtgttcaaat
gtaaaaaatgtatgcgaatgtaggagtaagctgattgcacagttctggaaattgcacatg
acttcaaagaggtgcccaaactgcaaagctaaaagatcactggttcgaaaagagcataac
agcaagttgacagttacctatcctactgcggtacgtcagaagtcaggcaaggaggccatc
gtggaacagccagcaaccatagatgagtctcatatggggaaaagaggctacatgacgcct
atcagtgccaaagaacatgttacagctctgtggaagaatgaaggtttctttctgagtcac
ctcttttcgggtctggaagttggtgagaattcaggattcagtcctgatatgttcttcctt
gatctcgttatggttccaccttcaagatatcgtcctgtgaatcgcctgggagaccagatg
ttcacaaatggtcagacggtaaatttgcaggctgttatgaaagatgtccagatgataagg
aagcttttggctttcatggctcaggaacaaagtcaatcaataaaaattggagagaatgaa
gtccaggaggagataaatgagccgttggaaccactggaccattccatcctggcaacaatc
ccgggacaaagcactgcagataaactctacaatatttgggttcgccttcagagccacgtc
aatattgtatttgatagtgacatggacaaactaatttcagacaaataccctggcatccgt
cagatactggagaagaaggaaggtctgttccgcaaacacatgatgggaaaacgtgtggat
tacgctgctcggtcggtcatttgccccgacatgtacatcggcacgaatgagattggcatc
cccatggtgtttgctacaaaactgacttatcctcaaccagtaactccatggaatatcaaa
gaactgaggcaggctgttataaatggtcccagtgttcaccctggagcctccatggtcatt
aacgaagatgggtctcgcacgattttgagcacaaccagccagacacagagggaatccata
gccaagcagctcctcactcctcccactggtgccccaaagtcagcaatgaaaatagtctgc
cgccatgttaaaaatggagatgtcctcttactgaaccgtcagcctacccttcatagaccc
tctatccaagcccaccgggctagaatcctgcctggagagaaggtgctgaggcttcactat
gccaattgcaaagcctacaatgctgactttgacggtgatgaaatgaatgctcattttcct
cagagcgaattgggccgagctgaagcgtacaccttagcctgcactgatgagcagtatctt
gttcccaaggatggcaaaccgctggcaggtttgatccaggaccacatgatctctggtgcc
agtatgacgattcgaggctgctttttcacgagggagcagtatatggagctggtctatcga
gggctcacagacaaaaaaggaagagtgaaaattcttccacctgccatcatgaaaccacaa
cagttatggacaggaaaacaggttgtttctacgttgttaataaacgtaattccagaaaat
cacatcccactgaatttgtccgggaaagctcagattggggcaaaagcctgggtgaaaggg
cctgtgaacaggattcctgggctgaatctagattcaatgtgtgaatctcaggttgtcatg
agagaaggggagttactttgtggggtcttggacaaggcacactatggcagctctgctttt
ggcctggtccattgttgctatgaggtttatggtggtgaaaccagcggcaaggtgcttacc
tgtctagctcgcctcttcactgcctacctgcaactctacaggggatttacaatgggggtc
gaagatattttggtgaaaccccgagcagaccacaaaagaggtaaaattattgaagagtcg
acctactgtggtaccaaggctgttagagctgcctttaatttgccagaaacaacatcacat
gaggaggtccaagggaaatggcaggatgctcatctctgcaaagaccagagggattttaat
atggttgatctgaaattcaaggaggaagtaaacaattacagcaatgaggttaacaaggta
tgtatgcctcttggtctccataggagcttcccagagaacaatttgcagctaatggtgcag
tcaggagccaaaggatcgactgtaaatacaatgcagatttcctgcttgctgggccagatt
gagttggaaggacgaaggcccccactaatggcatctgggaaatcattgccttgttttcag
ccgtacgatttttcccctagatctggaggatttgtgactggcagatttctcacaggcatc
aagcctgctgagttcttctttcactgcatggctggcagagaaggtctggtggacacagca
gtcaaaaccagtcgatctggttatctccaaaggtgtatcattaagcacttggaagggctg
gtggttcagtatgatctaactgtgcgggacagcgatggcagtgtggtgcagttcctatat
ggtgaagatgggcttgatattccaaagactccgttcctgcaaccgaagcagtttcctttc
attgcagataactatgaggtgatagagaagtctaagcatttggatgaagctttatccagg
atggatcctcatcaagcaagtcaacaattcagagccatcaaaaagtggcaagccaagcac
caaagctctttggcaagggaaggagcctttctgctgttcacacagaaaaaaatggcaagt
ttaagagaacagatctctgaaggggagaccaaaaatggcagaagtcctgccactcagcag
ttactgagcatgtggtatgaactggatgagaagaaacggagaaaatatttaaagaagacc
tccaaatgtcctgatcccagccttgctgtctggcgtccagatattcattttgcctctatt
tcagaaacatttgaagtgggagtagagaattatatcagggaatgggaagctcagaacaac
agaaactatgtaaaatcagagctttcttatgatagactgaagaacttgctgtatttaaag
tggcagcgatccctgtgtgacccaggagaagctgtgggcctacttgctgctcaaagcatt
ggggagccttctacacagatgactctgaacacctttcattttgctggcagaggtgaaatg
aatgtcactctgggtatcccgaggttacgagagatcctcatggtagccagtgcaaagatt
aaaacaccaatgatgagtgtgcctgtgctcaatactaagaaagctcaaaagagggtgaaa
agacttaagaaacagcttacaagagtgtacctagctgatgtcttgcagaacattaaaatt
gacgagtctctgtgcatagagggcaaacagagcaagtatcgccgctaccaaatcagattt
cacttcctgccgtatgaaagctatcgggaagagaagtgtctgaagccaagggatatcttg
cacttcatggagaccaggttatttaaaatcatgcttgaaacagttaaaaggaagagtaca
aagatggcatctttcagtgcaatcaacactcggaaggtgactcagaaggatctagatgga
gatgatggagcaactcaagcaaaccaggtacaggatgataatgaagctgaggctgaagaa
gggaggcctgtggatggtgaagctgaagaaggggatgctgatgctacagatgcaaagcgg
aaggagaagcaggaagaagaggttgattatgagagtgaggaagaggtgaatgaggaaaac
ggtgatgaaaattcagaagatgaagaaggtcccttgcttgatgataaaagggctgaggag
tctgaagaaggttcaaatgtattgtgccatgaggacgattctcaattttctgcctctagt
tctctgtctaagaaagagaaaacacctaaacaaaacgcatcagtagagctaagagtcagt
tctgtagtgagcagtcatccctccatagagaattacgaatacgatgtagaaaatgagctc
tggtgtgaggtttccctgaagcttcctctgatgaaggcatactttgatctctcctccttc
ctggagtccctcatgcaaaatacagttgtccatgagacaaaggggatcacgcgatgtttc
ttaaatgaaagcaccaacaagaaaggagagagagagcttattttgaacaccgagggaata
aacctgtctgaactgtttaaatattctgatgtcttggacttaagcaggctttattccaat
gacattcatgcgatggctaaaacttacggaatcgaggctgccctgagggtgattgaaaag
gaaattaaagatgtatttgccgtgtatggtatcgtgataaacccccggcacctttctctt
gtggcagattacatgtgttttgaaggtgtttataaaccactgaatcgctatggaatacag
tccagctcctcaccactgcagcagatgacatttgaaaccagctacaaattcttaaaggaa
gcaacaatgatgggtgcccacgatgaactgagatctccttctgcttgccttgtggttgga
aaagttgtcaaaggagggaccggtttgttcgacctcaagcaacctcttacatag
DBGET
integrated database retrieval system
