KEGG T02442: 101128415

Gorilla gorilla gorilla (western lowland gorilla): 101128415

Entry

101128415         CDS       T02442

Symbol

POLR1A

Name

(RefSeq) DNA-directed RNA polymerase I subunit RPA1 isoform X1

K02999

DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]

Organism

ggo Gorilla gorilla gorilla (western lowland gorilla)

Pathway

ggo03020

RNA polymerase

Brite

KEGG Orthology (KO) [BR:ggo00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    101128415 (POLR1A)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ggo03021]
    101128415 (POLR1A)
Enzymes [BR:ggo01000]
2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     101128415 (POLR1A)
Transcription machinery [BR:ggo03021]
Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     101128415 (POLR1A)

SSDB

Motif

Pfam:

RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4

Other DBs

NCBI-GeneID:

NCBI-ProteinID:

Ensembl:

UniProt:

LinkDB

Position

12:join(53721060..53721136,53726661..53726865,53728072..53728221,53736883..53736990,53737943..53738028,53738144..53738247,53743782..53743868,53745243..53745348,53745971..53746133,53748680..53748850,53748983..53749105,53751702..53751932,53756702..53756956,53761854..53762045,53774630..53774779,53775921..53776104,53779675..53779757,53779875..53780033,53781653..53781751,53783160..53783312,53783569..53783651,53784626..53784791,53785736..53785957,53786828..53787042,53788187..53788354,53789284..53789419,53789889..53790046,53794979..53795105,53796385..53796495,53797132..53797437,53798371..53798571,53800052..53800169,53800711..53800875,53801237..53801337)

AA seq 1720 aa
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRFLEENADPSASEIREELEQYTTEIVQNNLLGSKGAH
VKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDS
EPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTT
DEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQI
LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVNMTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREQYMELVYRG
LTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKET
PRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS
GAKGSTVNAMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALRHFRAIKKWQNKHP
NTLLRRGAFLSYSQKIQEAVKALKLESENGNGRSPGTQEMLRMWYELDEESRRKYQKKAA
ACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSVDRLRTLLQLKW
QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQ
FLPHAYYQQEKCVRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNA
GELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN
DDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMER
RVQAVREIHSFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGIT
RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAMANTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
LKQATMLGSHDELRSPSACLVVGKVVKGGTGLFELKQPLR

NT seq 5163 nt +upstreamnt +downstreamnt
atgttgatctccaagaacatgccctggcggcggctgcagggcatttccttcgggatgtat
tcggctgaagagctcaagaaattaagtgttaaatccattacgaaccctcggtacctggac
agcctggggaacccatcagcaaacggcctgtacgatttagctttgggccctgcagattcc
aaagaggtgtgctccacctgcgtgcaggacttcagcaactgttctgggcacctgggccac
attgagctcccactcacagtgtataaccctctcctcttcgataagctgtacctgctgctt
cggggctcttgtttaaactgccacatgctgacttgtccccgggccgtgattcacctctta
ctctgccagctgagggttctggaagtcggggccctacaagcagtctacgagcttgagaga
attctgaacaggtttctggaagaaaatgccgatccctctgcctctgaaattcgggaggag
ttagaacaatacacaactgaaattgtgcagaacaacctcctggggtccaagggtgcacat
gtaaagaacgtgtgtgagagcaagagcaagctcattgctctcttctggaaggcacatatg
aatgctaagcgctgtccccactgcaagactgggcgatccgttgtccgaaaggaacacaac
agcaagttgactatcacgtttccagccatggtgcacaggacagctggccagaaggactct
gagcccctgggaattgaggaagctcagataggaaaacgaggatacttaacacccaccagt
gcccgcgaacacctttctgccctgtggaagaatgaaggattctttctgaactaccttttt
tcgggaatggatgatgatggtatggaatccagattcaatcccagtgtgttctttctagat
ttcttggtggtgccgccctcaaggtatcgcccagtcagtcgcctaggagaccagatgttt
actaatggccagacagtgaacttgcaggctgtcatgaaggatgtagttctgattcgaaaa
cttctggcattgatggcccaagaacagaagctgccagaggaagtggccacacccactaca
gatgaggaaaaagactctttgattgctattgaccgatcctttttgagtacacttccaggc
cagtccctcatagacaaactttacaacatttggattcgccttcagagccacgtcaatatt
gtgtttgatagcgagatggacaaactaatgatggacaagtacccaggcattaggcagatc
ctggagaagaaagaaggcctgttccgaaaacacatgatgggaaagcgagtggactatgct
gcacgctcagtcatctgcccagacatgtacatcaacaccaacgaaattggaattcccatg
gtgtttgccacaaaactgacctacccacagccagttaccccatggaatgttcaggaactt
aggcaagcggtcatcaacggccccaatgtgcacccaggagcctccatggtcatcaatgag
gacggcagccgcacagccctgagcgctgtgaacatgacccagcgagaggccgtggccaag
cagcttctgaccccagccacgggggcacctaagccccaggggacaaaaattgtgtgccgg
catgtgaagaatggggacattctgctactgaaccgacagcccacactgcacagaccctcc
atccaggcccaccgtgcccgcatcctgcctgaagagaaagtgctgcggctccactatgcc
aactgcaaggcctataatgctgactttgatggagacgagatgaatgcccatttcccccag
agtgagctgggccgggccgaggcctacgtcctggcctgcaccgatcagcagtaccttgtt
cccaaggatggccagccattggcgggactgatccaggatcacatggtttcaggggcaagc
atgactactcggggttgctttttcacccgggagcagtatatggagctggtgtaccgagga
ctcacggacaaagtggggcgcgtgaagctcctttctccttccatcctgaagccctttccg
ctgtggacaggaaaacaggttgtgtcaacgctgctcataaatataatcccagaggaccac
atcccactgaacttatctggaaaggcgaaaatcactgggaaagcctgggtgaaggaaact
cctcgatccgttcctggctttaaccctgactcgatgtgcgagtcccaggtgatcatcagg
gaaggggagctgctctgcggagtgctggacaaggcgcactatgggagctccgcctacggc
ctggtccactgctgctatgagatctatggaggcgagaccagcggcaaggttctaacctgc
ctggcccgcctcttcaccgcctacctgcagctctacagaggcttcaccttgggcgtggaa
gacattttggtgaagccaaaggcagatgtcaagaggcaacgtatcattgaagaatccacc
cactgtgggccccaggctgtcagggctgcattaaacctgccagaagccgcatcatatgat
gaggtccgaggaaaatggcaggatgcccatctgggcaaggaccagagggattttaacatg
attgatctgaagttcaaggaggaagtgaaccattacagcaatgagattaacaaggcatgc
atgccttttggcctacacagacagttcccagagaacagcctgcagatgatggtgcagtcg
ggagccaaaggttcaactgtgaacgcgatgcagatctcgtgcctgctgggccagattgaa
ctggaaggtcggagacccccactgatggcgtctggcaagtcactgccctgctttgagcct
tatgagttcacccccagggctggtggctttgtcactggcagattcctcaccggcatcaaa
cctcctgagttcttcttccactgcatggcaggacgagagggccttgtggacactgctgtg
aaaaccagccgctcaggctatctccaaaggtgcatcatcaagcacctggaggggctggtc
gtgcagtatgatctcacggtccgtgacagtgacggcagtgtggtgcagttcctgtatggg
gaggatggcctggacatccccaagacacagttcctgcagcccaagcagttccccttcctg
gccagcaactacgaggtgataatgaaatcacagcatctccatgaagttttatccagagca
gatcccaaaaaagctctccgccacttcagagctatcaaaaaatggcaaaacaagcacccc
aacaccctgctgagaagaggcgccttcttgagttattcccagaaaattcaggaagctgtg
aaagccctgaaacttgagagtgaaaacggcaatggccgcagccccgggactcaggagatg
ctgaggatgtggtatgagttggatgaggaaagccgaaggaaataccagaagaaggcggcc
gcttgtcctgaccccagtctgtctgtctggcgtcctgacatctactttgcatcagtgtca
gaaacatttgaaacaaaggttgatgactacagtcaagagtgggcagctcaaacagagaag
agttatgagaaatcagagctttctgtcgacaggttgaggaccttgctgcagctgaagtgg
cagcgctcactgtgtgagccaggcgaggctgtgggcctgctggctgcccagagcatcgga
gagccctccacccagatgaccctcaacaccttccactttgcgggcagaggcgagatgaac
gtcaccctgggcattccaaggttgcgggagattctcatggtggccagcgccaacatcaag
acacccatgatgagcgtgcccgtgctcaacaccaagaaagccctgaagagagtgaaaagc
ctgaagaagcaactcaccagggtgtgcttgggggaggtgttgcagaaaattgacgtccag
gagtccttctgtatggaagaaaaacagaacaaattccaggtgtaccagctgcggtttcag
ttcctgccacatgcatattaccagcaggagaagtgcgtgagacccgaggacatcctgcgc
ttcatggaaacaagattctttaaacttctgatggaatccatcaaaaagaagaataataaa
gcatcagccttcaggaacgtaaacactcgaagagctacgcagcgggatctggacaacgct
ggggagttggggaggagtcggggagagcaggagggtgatgaggaagaggaggggcacatt
gtggatgctgaagctgaggagggggacgctgatgcctctgatgccaaacgcaaggagaag
caggaggaggaggttgattatgagagtgaggaagaggaggagagggagggcgaggagaac
gacgatgaagacatgcaggaggaacgaaatccccacagggaaggtgctcgaaagacccaa
gagcaagacgaagaggtgggcttaggcactgaggaggacccgtcccttcccgccctcctg
acgcagccccggaaacccacccacagccaggagccccaagggcccgaggccatggagcgc
cgggtccaggctgtgcgtgagatccactcgttcatagatgactaccagtacgacaccgag
gagagcctgtggtgccaggtgacagtgaagctccctctgatgaagatcaactttgacatg
agctccctggtagtatctttggcccatggtgccgtcatctatgcgaccaagggcatcact
cggtgcctcctgaatgaaacaaccaacaataagaacgagaaggagcttgtgctaaacaca
gaaggaatcaacctcccagagctgttcaagtatgcagaggtcctggatctgcgccgcctc
tactccaacgacatccatgccatggccaacacgtatggcatcgaggccgcgctgcgggtg
atcgagaaggagatcaaggatgtctttgccgtgtatggcatcgcggtcgaccctcgccat
ctctccctggttgctgattatatgtgcttcgagggtgtttacaagccactgaatcgcttt
gggatccggtcaaactcttccccgctacagcagatgacgtttgaaaccagcttccagttt
ctgaagcaagccaccatgctgggatcccacgatgagctgaggtctccttctgcctgcctt
gtggtcgggaaggtcgtcaagggcgggacaggcctgttcgagctcaagcagcctctgaga
tag

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