Gemmatimonas groenlandica: HKW67_05925
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Entry
HKW67_05925 CDS
T07783
Symbol
kdsA
Name
(GenBank) 3-deoxy-8-phosphooctulonate synthase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
ggr
Gemmatimonas groenlandica
Pathway
ggr00540
Lipopolysaccharide biosynthesis
ggr01100
Metabolic pathways
ggr01250
Biosynthesis of nucleotide sugars
Module
ggr_M00063
CMP-KDO biosynthesis
Brite
KEGG Orthology (KO) [BR:
ggr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HKW67_05925 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
ggr01005
]
HKW67_05925 (kdsA)
Enzymes [BR:
ggr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
HKW67_05925 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
ggr01005
]
Lipid A
HKW67_05925 (kdsA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Motif
Other DBs
NCBI-ProteinID:
QJR35078
UniProt:
A0A6M4IMF3
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All DBs
Position
1406879..1407703
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AA seq
274 aa
AA seq
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MTPSLFPADRLFLIAGPCQLEDDTLNLRVGEALARLAEHVPGGVIFKASFDKANRSNVDG
VRGPGLEAGLAALERVRAATGLPILTDVHEASQCAIAAEVVDVLQIPAFLCRQTDLLLAA
GATGKAVNVKKGQWMHPEGMRGAVRKVEAGAALAAVASGALAVTERGTFFGYGDLVVDMR
SFARMRESCDVPVIFDATHSVQRPGQGAGGTSGGAREFIPPLTLAAIAAGAQGLFIETHP
DPDHAPSDGPNMLRLDQMADLMSRVVDIWDRVRS
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgactccgtcgctttttccggccgaccgtctcttcctcattgccggcccctgccagctc
gaggacgacacgctcaacttgcgcgtcggcgaagcgctggcgcgattggccgagcatgtg
ccgggaggcgtcattttcaaggccagctttgacaaggcgaatcgctcgaatgtcgatggg
gttcgcggaccggggctcgaggcgggactggcagcgctcgaacgggtccgggctgcgaca
gggctgcccatcctcaccgatgtgcacgaagcgtcgcagtgcgccatcgccgctgaggtc
gtggatgtgttgcagatcccggcatttctctgtcggcagaccgacctgctcctggccgcc
ggcgccacgggaaaggcggtgaacgtaaagaaggggcagtggatgcatcccgagggcatg
cgcggcgcggtgcgcaaggtggaagcgggcgcggcgctcgcggcagtggcatcgggcgcg
ttggctgtcaccgaacgcggcacgttcttcgggtatggtgatctggtggtggatatgcgc
agtttcgcgcgtatgcgcgagtcgtgcgatgtcccggtgatcttcgacgcgacgcacagc
gtgcagcggcccggacaaggcgccggcggcacgagtggcggtgcgcgtgagtttattcca
ccgctcacgctggccgcgatcgccgcgggcgcgcaggggctgttcatcgagacgcatccg
gatccggatcacgcgccgagcgatggaccaaacatgctgcgtctcgatcagatggcggac
ctgatgtcgcgcgtggtcgacatctgggatcgcgtgcgttcgtga
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