Gossypium hirsutum (upland cotton): 107886140
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Entry
107886140 CDS
T04793
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107886140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107886140
03012 Translation factors [BR:
ghi03012
]
107886140
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107886140
Translation factors [BR:
ghi03012
]
Eukaryotic type
Release factors
107886140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
107886140
NCBI-ProteinID:
XP_016665473
UniProt:
A0A1U8HQA4
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All DBs
Position
A03:complement(17941034..17943901)
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AA seq
436 aa
AA seq
DB search
MADGHESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYSKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPSTSQPNVSGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYQLKNSTTGEITIKHLNKEQEANESNFRD
PVSSADLEVVEKMPLLEWFANDYRQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDEFSDEEVYDDSE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtcacgagagtgacaagaatattgagatatggaagatcaagaagcttatt
aaagcacttgaagccgctagaggcaacggcaccagcatgatatctctcataatgcctcca
cgtgatcagatttcaagggttaccaagatgctgggagatgaatttggaacagcttcaaac
atcaaaagcagagtcaaccgtcaatctgtgttaggtgcaatcacatctgctcagcagagg
ctcaaactttatagtaaggttcctcccaacggacttgtgctctacactggaacaattgtg
actgatgatgggaaagaaaagaaagtcacaattgattttgagcctttcaggcctataaat
gcttctctttatctctgtgacaacaagtttcacacggaggcactgaatgaacttttggag
tcggatgataagtttggttttattgtgatggatggtaacggaactctttttgggacatta
agtggtaacaccagggaggtacttcataagttcagtgttgatcttccaaagaagcatggg
agaggtggacaatcagcccttcgttttgctcgacttcgaatggaaaagcgccacaactat
gtgaggaagacagctgaacttgctactcaattttttatcaacccttccaccagccagcct
aatgtatctggattaatattggctggatcagctgatttcaaaactgagctgagtcaatct
gatatgtttgatcagcggcttcaggctaagattctgaatgtggttgatgtctcttatgga
ggagagaatggtttcaaccaggcaattgagctttcctctgaaatcctggcgaatgtgaaa
ttcatacaggagaagcgcttaatagggaaatactttgaggagatcagtcaagatactggg
aagtatgtttttggagtggatgacacactgaaggcgttggagatgggagcagttgagaca
cttatagtgtgggaaaatctggacataaatcggtatcagctgaagaatagcactactggt
gaaattaccataaaacatttaaacaaggagcaggaagccaatgagagcaacttccgcgat
ccagtcagctctgcagatctggaggttgttgagaagatgccactcttagagtggtttgct
aatgactacaggcagtttggctgtagccttgagtttgttaccaacaaatcccaggagggt
tctcagttctgccgtgggtttggcggtattggaggcatccttcgataccaactagacatg
cgatcatttgatgaattttctgatgaagaagtatatgatgattctgaatag
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