Gossypium hirsutum (upland cotton): 107886372
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Entry
107886372 CDS
T04793
Name
(RefSeq) protein CHROMATIN REMODELING 19
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107886372
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
107886372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
107886372
NCBI-ProteinID:
XP_016665788
UniProt:
A0A1U8HP84
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Position
A03:83688548..83695776
Genome browser
AA seq
734 aa
AA seq
DB search
MKRVFEEISDEEWENHSFKPSRVLKKNPNPPPIESFAFNSQTQASFSDQSSDDCVEIEHL
ADDSNLEDDVEPEDAGPINRARRFVVDEDDDDEEDGDGRDSNENGFEELYDVESSEEEQL
QEDDVVGKALQKCAKISAELRKELYGSSGASCERYAEVEASSVRIVTQNDIDAACAVVDP
EFQPVLKPYQLVGVNFLLLLHRKGIGGAILADEMGLGKTIQAITYLTLLKHLKNDPGPHL
IVCPASLLENWERELKKWCPSFSVLQYHGAGRASYSKELSYLSKAGLPPPFNVLLVCYSL
FERHSVQQKDDRKILKRWKWSCVLMDEAHALKDKNSYRWKNLMSVARNAKQRLMLTGTPL
QNDLHELWSLLEFMMPDLFATEDVDLKKLLNAEDRELIGRMKSILGPFILRRLKSDVMQQ
LVPKIQRVEYVIMEKHQENAYREAIEEYRTISRARIAKLSEPDLNNIIGIIPRRQISNYF
VQFRKIANHPLLVRRIYDDDDVGRFAKRLHSIGVFECTLDRVVEELKNYSDFSIHQLLLR
YGITGGKGTLSDEHVMLSAKCQALAELLPSLKRSGHRVLIFSQWTSMLDILEWTLDVIGV
TYRRLDGSTQVTDRQTIVDDFNNDTSIFACLLSTRAGGQGLNLTGADTVVIHDLDFNPQI
DRQAEDRCHRIGQTRPVTIYRLVTKGTVDENVYEIAKRKLTLDAAVLESGLDVGNKDNTS
EKTMGQILSSLLMS
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgttttcgaggaaatctcagacgaagaatgggagaaccactctttcaagcct
tctcgtgttttgaagaaaaaccctaatcctcctccaattgagtctttcgctttcaattcc
caaactcaggctagcttttccgaccaaagcagcgatgattgtgtcgaaatcgaacatttg
gctgatgattccaacttggaagacgacgttgagcccgaggatgccgggccgatcaaccgt
gcgcgtcgattcgtcgttgatgaagacgatgacgacgaagaagatggtgatggaagagac
agcaatgagaatggttttgaggagctgtatgacgttgagtcgagtgaagaggagcaattg
caagaggatgacgtggtggggaaggcgttgcagaagtgtgcgaaaatatctgcggagcta
cggaaggagctgtatgggagttccggtgcttcttgcgagcgatacgccgaagtagaagct
tcttcagtgagaatcgttacacagaatgatattgatgcagcatgtgcagtggtggacccg
gaatttcagccagttctcaagccatatcaactggttggtgtaaattttcttcttctgttg
catcgtaagggcattggtggagctatattggcagatgagatgggtcttgggaaaaccatt
caggctattacatatctgactttgctgaaacatctgaaaaatgatcctggtcctcattta
atagtttgtcctgcctcacttttggaaaactgggaaagagaacttaagaagtggtgcccc
tcattttctgtacttcagtatcatggtgctggccgagcatcttattcaaaagagttgagt
tatttgtccaaagctggattgccacctccatttaatgttcttcttgtgtgttattcactt
tttgaaagacacagtgtgcagcagaaggatgaccgtaaaattctgaaacgatggaaatgg
agctgcgtgctaatggatgaggcccatgctttgaaggacaagaacagctacaggtggaaa
aatctaatgtcagttgctcgaaatgcaaagcagcgtcttatgctaacaggcacaccactg
caaaatgatttacatgagctgtggtctttgctagagttcatgatgcccgacctttttgcc
actgaggatgtagatctgaagaagctactaaatgcagaagatagggagctaattggtcgt
atgaagtccatcttgggaccattcatcttgaggcgtttgaaatcagatgtgatgcagcag
cttgtcccaaagatacagcgggttgagtatgtgattatggaaaagcatcaagaaaatgct
tatagggaagctatagaagagtatcgcacaatttcgcgagcacgcattgcaaagttatca
gagcctgacttgaataatatcattgggattattcctcgacgtcagatctctaactatttt
gttcagtttcgcaagattgcaaatcatccattattagtgaggcgaatatatgatgatgat
gatgttggtcgcttcgctaaaaggttacattcgattggtgtttttgaatgtaccttggac
agagtagttgaggaattaaagaattacagtgacttttccattcatcagcttttacttcgt
tatggaattactggtggtaaaggaactctttctgatgaacatgttatgctttctgctaaa
tgccaggcattagcagagcttctcccttcactcaagagaagtgggcaccgtgttctgatt
tttagccagtggacatcaatgcttgatatcttagagtggactttagatgtgattggggtt
acatatagacggcttgatggaagcactcaggtgaccgataggcagactatagttgacgat
ttcaataatgacacttctatatttgcgtgcttgttgtccacgagagctggagggcaaggt
ttgaacttaacaggagctgatactgtagttattcatgacctggattttaatccacagata
gaccgacaggctgaagatcgctgccatcgaattggccaaacaaggccagttaccatatac
aggctggttacgaaaggtacagttgatgagaatgtttatgagattgcaaaaaggaagttg
actcttgatgcagcggtgctagagtctggattggatgtaggcaataaagataacacatct
gagaaaacaatggggcagatattatcatccctacttatgagctag
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