Gossypium hirsutum (upland cotton): 107889440
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Entry
107889440 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107889440 isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107889440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107889440
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
107889440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
TOR1L1_N
HEAT_MROH2B_C
TPR_DNAAF5
HEAT_2
Cnd1
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
107889440
NCBI-ProteinID:
XP_016669344
UniProt:
A0A1U8I100
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Position
A09:72586244..72596702
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AA seq
860 aa
AA seq
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MVRSKASSKKQQKKGIDFKKIKRKLGRKLPPPKNATNTEIKSKAIVLPEQSVATNKEGLA
VSKKGLTLKELLQQTSHHNAKVRRDALMGIKDLVLNHPAELRLHRYAVIEKLRERISDDD
KVVREALYQLFKSEIFPGCAEDNQGLLISLLMTYIFNAMTNLAIDIRLMAFKFFDLVVQY
YPPCFSLYAEKILQSYEDILRKNQYYVEDKGKLRTTLSGLVRCLSLLPSKKPESEKGISG
DRMIHAFEPDAPTANTGFSTIIKKLKELVLVLINCFQDFIPLLISMPQLDAQSFDCILSM
LQSIDIAVRFFIYGTHEVAPESICNQTLSSPLSKKLLGAFPLYPKHHLSVKEDDRYFILN
IVITEIFLHLRGWICPSANVFEKFLEFIENALLGTICCSTRSGKAAWEKHVSSLLPFIPK
LASEVETCWQSRILESFTQTFKGCNPESSLKLACLSMIEEMLIPNGDKHYTEASDTVVLD
FQTVWIRELPLLLMLLGDRQPSSSQVVLRLLLRLGQFSGSNSFLFWEYENTQFALSEFYS
TCEEGNIYYGPFMRLPRDCQELSICCLYYFSNLSGLFLKSVALCCLCPQLEPFVSFRILE
VLHAAYKAGHIQIADHISFFMTLLSRFKVFPENIDPVRESDVKVSNHGAFKSLTSVLCSY
LSQMGDSSVVLQILDKAIIGLILLQPPLDNACTMLRVLIVLDSKPTRLSEQSIIALSNFL
PGYLMDVVHCIPEDDVRTWRYYLLPCFFLFDRSNRILKLVLDVIGSFLTDSNLSLPSDTS
TRYATDSLSRINATISLLLLMYKDIKVQKIISLFRTEVSSILQSIASLQSSEVKMTLEGR
HRFQCSFEQLKVVTSTSPAG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgttcgaaggcttcttcaaagaagcagcaaaagaaaggcatagatttcaaaaaa
ataaagagaaagctaggcaggaaattgcctccaccgaagaatgccacaaatactgaaatt
aaatccaaagcaattgtacttcctgagcagagtgtggcaacaaacaaggaaggtttagct
gtgagtaagaaaggattgactttgaaagaacttcttcagcaaacatctcatcataacgcc
aaagttcgaagggatgcattaatgggaatcaaggatttagtccttaatcatccagcagag
ttgaggctgcacagatatgcagttatagagaaactgcgggagcggataagtgatgatgat
aaagtagttagagaagcgttatatcaactgtttaagtctgaaattttccctggttgtgct
gaggataatcaaggacttctcatctccttattgatgacatatattttcaatgcaatgaca
aatttagcaattgacatccgcttgatggctttcaaattttttgatcttgttgtgcaatac
tatcctccttgcttttcattatatgctgagaagattcttcagagctatgaagatatttta
aggaaaaaccagtattatgtagaagacaagggaaagctcagaactactctttcagggtta
gtccgctgcctgtcactgttgccaagcaaaaagccagaatctgaaaagggtatttcagga
gacaggatgatacatgcttttgagcctgatgcaccaacagcaaatactgggttctctacc
attatcaagaaactaaaggagcttgtgctagttctaataaactgtttccaagattttatt
ccattgctcatttctatgccacaactggatgcacaatcatttgattgtatattatccatg
cttcaaagcatagatattgctgtaagattttttatttatggtactcatgaagtggcacct
gagtcaatatgcaatcaaactctctcatcacccttgtcaaagaagttattgggagcattt
cccctttatccaaaacaccacctttctgtgaaggaggatgatagatattttatcctgaac
attgtcataacggagatatttttgcacctccggggatggatctgcccttctgcaaatgtg
tttgagaaatttctcgagtttatagagaatgcactactcggcacgatttgttgtagcaca
cgttctggtaaagcagcatgggaaaagcatgtatcttcattgcttcctttcattcccaaa
cttgcatcagaagtggaaacttgttggcagtcacgcattcttgagtcatttactcagaca
ttcaagggttgcaatccagagtcttcacttaaattggcttgcctgtccatgattgaagaa
atgttaattcctaatggagataagcactatactgaagcaagtgatactgtggtattagac
tttcagactgtttggataagagagctgcccttgttgttaatgctacttggtgatagacaa
ccatcctcttctcaggttgtcttgcgccttcttcttcgtcttgggcaattttctggttca
aactcttttcttttttgggaatatgaaaatactcaatttgcactcagtgagttttacagc
acatgtgaagaaggaaacatatactatggtcctttcatgagacttcctagggattgtcag
gagttgtctatctgttgcctttattatttctctaacttgagtggtctttttctgaaatca
gtagctttatgttgcctgtgtcctcaattggagccatttgtatctttccgcattttagag
gttctgcatgctgcctacaaagctggacacatccaaattgctgaccacatcagcttcttc
atgactttactatctcgtttcaaagttttccctgaaaatatagatcctgttagagaaagt
gatgtgaaggtttcaaatcatggagcttttaagtctctcaccagcgtgctttgctcatac
ttgtcacagatgggtgatagttctgttgttttacaaatactagataaagcaatcattggc
ttgatattgttgcaaccacctcttgacaatgcatgtacaatgttgagagtgctcattgtg
ctggactctaaacccactaggctttctgaacaaagtataattgctctaagcaatttcctt
cccggatatcttatggatgttgtgcattgtattccagaagatgatgttcgcacatggcgt
tattaccttctaccatgctttttcttgtttgataggagtaacaggattctgaagcttgta
ttggatgtaattggttcatttttaactgacagtaatttgtcgcttccatctgatacctct
acaagatatgccactgacagtctcagtcggataaatgcaactatttctctgctactatta
atgtacaaggacattaaagttcagaaaattatttctttattcagaacagaggtcagctca
attttgcaaagcatagcttctttacagtcttcagaagtcaagatgacccttgaaggaagg
cacagatttcaatgttcatttgaacaattaaaggtggttactagtacatcaccagctggc
tga
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