Gossypium hirsutum (upland cotton): 107890497
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Entry
107890497 CDS
T04793
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00450
Selenocompound metabolism
ghi00970
Aminoacyl-tRNA biosynthesis
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
107890497
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107890497
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107890497
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107890497
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
107890497
Amino acid related enzymes [BR:
ghi01007
]
Aminoacyl-tRNA synthetase
Class I (U)
107890497
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107890497
Prokaryotic type
Other AARSs
107890497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA_bind
Anticodon_3
tRNA-synt_1
Anticodon_1
tRNA-synt_1e
CoV_peptidase
DUF6823
Motif
Other DBs
NCBI-GeneID:
107890497
NCBI-ProteinID:
XP_016670447
UniProt:
A0A1U8HWQ7
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All DBs
Position
D09:complement(50621006..50627348)
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AA seq
800 aa
AA seq
DB search
MGDPNQMAPKLPVAGKRNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIY
ICGTDEYGTTTETKAVEENCTPQEICDKYHALHKEVYDWFDISFDKFGRTSSPEQTEVCQ
AIFKKLWENNWLTEKPMQQLFCDTCQRFLADRLVEGTCPDGGCNYNSARGDQCEKCGKLL
NPTELKEPRCKACQNTPRIRDTRHLFLELPLLKDKLVEYINKMSVDGSWSQNAINTTQAW
LTEGLKARCITRDLKWGVPVPHENFKDKVFYVWFDAPIGYVSITKCYTSDWEKWWKNPEN
VELFQFMGKDNVPFHTVMFPSTLLGTSENWTLMKSISVTEYLNYEAGKFSKSKGIGVFGN
DVKDTKIPVEVWRYYLLTNRPEVSDTLFTWDDLQAKLNNELLSNLGNFINRVLSFIAKPP
GQGYGSIIPDSPTAESHPLTKALSEKVGKHVEQYIEAMEKVKLKQGLRTAMSLSGEGNAY
LQESQFWKLYKEDQPSCSIVMRTAVGLVHILACLLEPFIPSFSVEVFKQLNLPPQAQISL
CDEKGDINRASRPWEIIPAGHKIGDPKPLFEELKTERVEELRQQYAGSQADRRARAEADA
AKTAEQLKKTKISDSKKEKAKKSSANSKEKPTAEPEISITRLDIRVGKIIKAQKHPDADS
LYVEEIDVGEAQPRTVVSGLVKYIPLEEMQDRMVCVLCNLKPATMRGIKSHAMVLAASNN
DHTKVELVEPPKSAKVGERVTFPGFTGEPDDVLNPKKKVWETLQVDLHSDANLVACYKDI
PLTTSAGICKVSSIANGSIR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgggagacccaaatcagatggctccgaagcttccagtcgctgggaaacgcaacgtcctc
atcaccagcgccttgccttacgtcaacaacgtccctcatctcggcaacatcatcggatgt
gtcttaagcgccgacgtttttgctcgctattgccggttgcgaggctataatgctatatat
atttgtggaaccgatgagtacggaacgacgacggagactaaagccgtggaagagaattgt
actcctcaagagatttgtgacaagtatcatgcacttcataaggaagtttatgattggttt
gatataagtttcgataagtttggaagaacatcgagtccggaacaaactgaagtttgccaa
gcaattttcaagaagctatgggagaacaattggcttacggagaaaccaatgcaacagctt
ttttgtgatacatgccaacgattcctggctgatcggcttgtggaaggaacctgtccagat
ggagggtgtaactacaattctgctcgtggagatcaatgtgaaaagtgcgggaagctcttg
aatcctactgaactaaaagaacctaggtgcaaggcctgccaaaatactccacgtattcgt
gacacaaggcacttatttcttgagcttcctttgctaaaggataaattagttgagtacatc
aacaaaatgtcagttgatggttcttggagccaaaatgctattaatacaacacaagcttgg
ctcacagaaggacttaaagctcggtgtattaccagagacttgaagtggggggttcctgtt
ccacacgagaattttaaggacaaggttttctatgtctggtttgatgcacctattggatat
gtctcaattactaaatgctacacatctgattgggaaaaatggtggaaaaatcctgaaaat
gtggagctgtttcagttcatgggaaaagacaatgtaccatttcatactgtgatgtttcca
tcaactcttcttgggaccagtgaaaactggacattgatgaaaagcatcagtgttacagag
tatttaaattacgaagctgggaagttctccaagagtaaaggcataggagtttttggcaat
gatgtaaaggatacaaaaatacctgtagaagtgtggagatattacttgttaaccaataga
cctgaggtttctgacaccttgtttacatgggacgacttgcaagcaaaactgaataatgag
ttgcttagtaatttgggcaacttcatcaatcgagtgttgagctttattgcaaaacctcct
ggtcaaggatatggttccattattcctgattctccaactgctgagtcacatcccttgaca
aaggctttaagtgagaaagttggtaaacatgtagagcaatatattgaagccatggagaag
gtgaaattaaagcaaggattaagaactgcaatgagcctctcaggtgaaggaaatgcatat
ctgcaagaaagccaattttggaagctttacaaagaagaccaaccttcttgttcaattgtt
atgagaactgcagtggggctagtgcatattcttgcatgcctattggaaccttttattcca
tctttttctgttgaggtatttaagcaacttaatttgcctcctcaagcacaaatttccctt
tgtgatgagaaaggagacattaatagggcttcaagaccgtgggagataataccagctggg
cataaaattggagatccaaaacctttatttgaggaactgaaaactgaaagagttgaagag
ttaaggcaacaatatgccggaagtcaagctgataggcgtgcaagggcagaagccgatgct
gcaaagactgctgagcaactgaagaaaacaaaaatttcagatagcaagaaagagaaggct
aagaaatcttcagccaactctaaagaaaagcccactgctgaaccggaaatttccatcaca
agactcgatattcgggttggcaagattataaaagctcaaaagcatcccgatgctgattct
ctgtatgttgaagagatcgatgtgggtgaagcccagcctcgaacagttgttagtgggctc
gtgaaatatattcctttggaagagatgcaggatcggatggtttgtgttctttgtaatttg
aagcctgcaaccatgcgcggtataaaatcacatgcaatggttcttgcagcttcgaacaat
gaccacaccaaggtggaattggttgaaccaccaaagtcggccaaggtcggagagcgagtt
acctttcctggtttcacgggcgagccggatgatgtgttaaacccaaagaaaaaggtttgg
gaaactctacaagtggatctccacagtgatgcaaatctggtggcctgttataaagatatt
cctttgaccacatctgctgggatttgcaaagtttcctccattgccaatgggtcaattaga
taa
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