Gossypium hirsutum (upland cotton): 107891183
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Entry
107891183 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107891183 isoform X1
KO
K14827
pre-rRNA-processing protein IPI1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
107891183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107891183
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
107891183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TEX10
Ipi1_N
HEAT_MROH2B_C
TOR1L1_N
TPR_DNAAF5
HEAT_2
HEAT_EZ
Cnd1
Motif
Other DBs
NCBI-GeneID:
107891183
NCBI-ProteinID:
XP_016671374
UniProt:
A0A1U8I6K9
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Position
D09:43226523..43237054
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AA seq
860 aa
AA seq
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MVRSKAPSKKQQKKGIDFKKIKRKLGRKLPPPKNATNTEIKSKAIVLPEQSVATNKEGLA
VSKKGLTLKELLQQTSHHNAKVRRDALMGIKDLVLNHPAELRLHRYAVIEKLRERISDDD
KVVREALYQLFKSEIFPGCAEDNQGLLISLLMTYIFNAMTNLAIDIRMMAFKFFDLVVQY
YPPCFSLYAEKILQSYEDILRKNQYYLEDKGKLRTTLSGLVRCLSLLPSKKPGSEKGISG
DRMIHAFEPDAPTANTGFSTIIKKLKDLVLVLINCFQDFIPLLISMPQLDAQSFDCILSI
LQSIDIAVRFFIYGTHEVAADSICNQTLSSSLSKKLLGVFPLYPKHHLSVKEDDRYFILN
IVITEIFLHLREWICPSANVFEKFLEFIENALLGTICSSTRSGKVAWEKHVPSLLPFIPK
LASEVETRWQLRILESFTQTFKGCNPESSLKLSCLSMIEEMLIPNGDKHYTEASDTVVLD
FQTVWIRELPSLLMLLGDRQPSSSQVVLRLLLRLGQFSGSNSFLFWDYENTQFALSEFYS
TCEEGNIYYGPFMRLPRDCQELSICCLYYFSNLSALLLKSVALCCLCPELELFVSFRIIE
VLHAAYKAGHIQIADHISFFMTLLSRFKVFPENIDPVRESDVKVSNHGAFKSLTSVLCSY
LSQMGDSSVVLQILDQAIIGLILLQPPLDNACAMLRVLILLDSKPTRLSEQSIIALSNFL
PGYLMDVVHCIPEDDVRTWRYYLLPCFFLFDRSNKVLKLVLDLIGSFLTDSNLSLPSDTS
TRYATDNLSRINATISLLLLMYKDIKVQKIISLFRTEVSSILKSIASLQSSEVKMNLEER
HRFQCSFEQLKVVSSTSPAG
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgttcgaaggctccttcaaagaagcagcaaaagaaaggcatagatttcaaaaaa
ataaagagaaagctaggccggaaattgcctccaccgaagaatgccacaaatactgaaatt
aaatccaaagcaattgtacttcctgagcagagtgtggcaacaaacaaggaaggtttagct
gtgagtaagaaaggattgactttgaaagaacttcttcagcaaacatctcatcataacgcc
aaagttcgaagggatgcattaatgggaatcaaggatttagtccttaatcatccggcagag
ttgaggctgcacagatatgcagttatagagaaactgcgggagcggataagtgatgatgat
aaagtagttagggaagcgttatatcaactgtttaagtctgaaattttccctggttgtgct
gaggataatcaaggacttctcatctccttattgatgacatatattttcaatgcaatgaca
aatttagcaattgacatccgcatgatggctttcaaattttttgatcttgttgtgcaatac
tatcctccttgcttttcattatatgctgagaagattcttcagagctatgaagatatttta
aggaaaaaccagtattatttagaagacaaggggaagctcagaactactctttcagggtta
gtccgctgcctgtcactgttgccaagcaaaaagccaggatctgaaaagggtatttcagga
gacaggatgatacatgcttttgagcctgatgcaccaacagcaaatactgggttctctacc
attatcaagaaactaaaggaccttgtgctagttctaataaactgtttccaagattttatt
ccattgctcatttctatgccacaactggatgcacaatcatttgattgtatattatccata
cttcaaagcatagatattgctgtaagattttttatttatggtactcatgaagtggcagct
gattcaatatgcaatcaaactctctcatcatccttgtcaaagaagttattgggagtattt
cccctttatccaaaacaccacctttctgtgaaggaggatgatagatattttatcctgaac
attgtcataacggagatatttttgcacctccgggaatggatctgcccttctgcaaatgtg
tttgagaaatttctcgagtttatagagaatgcactgctcggcacgatttgtagtagcaca
cgttctggtaaagtagcatgggaaaagcatgtaccttcattgcttcctttcattcccaaa
ctagcatcagaagtggaaactcgttggcagttacgcattcttgagtcatttactcagaca
ttcaagggttgcaatccagagtcttcacttaaattgtcttgcctgtccatgattgaagaa
atgttaattcctaatggagataagcactatactgaagcaagtgatactgtggtattagac
tttcagactgtttggataagagagctgccctcgttgttaatgcttcttggtgatagacaa
ccatcctcttctcaggttgtcttgcgccttcttcttcgtctcgggcaattttccggttca
aactcttttcttttttgggactatgaaaatactcaatttgcactcagtgagttttacagc
acatgtgaagaaggaaacatatactatggtcctttcatgagacttcctagggattgtcag
gagttgtctatctgttgcctttattatttctctaacttgagtgcacttttgctgaaatca
gtagctttatgttgcctgtgtcctgaattggagctttttgtatctttccggattatagag
gttctgcatgctgcctacaaagctggacacatccaaattgctgaccatatcagcttcttc
atgactttactatctcgtttcaaagttttccctgaaaatatagatcctgttagagaaagt
gatgtaaaggtttcaaatcatggagcttttaagtctctcaccagcgtgctttgctcatac
ttgtcacagatgggtgatagttctgttgttttacaaatactagatcaagcaatcattggc
ttgatattgttgcaaccacctcttgacaatgcatgtgcaatgttgagagtgctcattctg
ctggactctaaacccactaggctttctgaacaaagtataattgctctaagcaatttcctt
ccaggatatcttatggatgttgtgcattgtattccagaagatgatgttcgcacatggcgt
tattaccttctaccatgctttttcttgtttgataggagtaacaaggttctgaagcttgta
ttggatttaattggttcatttttaactgacagtaatttgtcgcttccatctgatacctct
acaagatatgccactgacaatctcagtcggataaatgcaactatttctctgctactatta
atgtacaaggacattaaagttcagaaaattatttctttattcagaacagaggtcagctca
attttgaaaagcatagcttctttacagtcttcagaagtcaagatgaaccttgaagaaagg
cacagatttcaatgttcatttgaacaattaaaggtggttagtagtacatcacctgctggc
tga
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