Gossypium hirsutum (upland cotton): 107892377
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Entry
107892377 CDS
T04793
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107892377
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
107892377
Condensin II
107892377
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_29
ATG16
FlaC_arch
Laminin_II
SlyX
ABC_tran
Motif
Other DBs
NCBI-GeneID:
107892377
NCBI-ProteinID:
XP_016672936
UniProt:
A0A1U8I3Y1
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Position
D09:complement(3872114..3882229)
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AA seq
1245 aa
AA seq
DB search
MGMETKDEFATREPDRAQVGSRGPRLVINEMVMRNFKSYAGEQRVGPFHKSFSAVVGPNG
SGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVHFQEIIDLDDGTYE
AVPGSEFVISRVAFRDNSSKYYINNRASNFTEVTKKLKGKGVDLDNNRFLILQGEVEQIS
LMKPKAQGPHDEGFLEYLEDIIGTNKYVEKIDESSKELESLNEKRSGVVQMVKLAEKERD
SLEDVKNEAEAYMLKELSLLKWQEKAAKLAHEDTSLKMVELRENVSNVEENLKNKREEIQ
ESSKRLKEIESVHNKHLIRKEELDNDLRTCKEEFKEFERQDVKYREDLKHMKQKLKKLED
KLEKDSSKIEDVSKECENSKNLIPKLEENIPKLQKLLLDEEKVLEEMKENSKVETEKYRS
ELSKVRAELEPWEKELIVHKGKLEVAHTERNLLTQKHEAANTAFKDAQKEMDNILGKTET
ITAAVKDKQTDLEKNKLGALEARKLEQTCIKEQEALIPLEQVAREKFAELKSVLDSEKSQ
GSVLKAILQAKESKQIEGIYGRMGDLGAIDAKYDVAISTACPGLDYIVVETTAAAQACVE
LLRREQLGIATFMILEKQLDLLERSKEKVRTPEGVPRLYDLIKVQDERIKLAFYAALGNT
IVAKDLDQATRIAYGGNKEFRRVVTLDGALFEKSGTMSGGGSKPRGGKMGTSIRAASVSR
ETVVAAEKELANMVDSLNNIRQRIADATRCYQASEKVVAELDMEIAKSQKEVDSLNSEYK
YLEKQLDSLEAASRPKKDEIDRLEELKKIISTEEKEIDRLIQGSKKLKEKASDLQNKIEN
AGGEKLKTQKSKVEKIQSDIDKNSTEINRHKVQIETGEKMVKKLTKGIEESKKEKERIIE
GKDKMHGMFKEIEQKAFTVQDNYKKMQKVINEHGEVLEKSKLEYEKVKKNVDQLRASEVD
ADFKLQDMKKMYKELEMKGKGYKKKLNDLEISLQKHMEQIQKDLVDTEKLQATLADETLT
EACDLKRALEMVTLLETQLKEMNPNLDSISEYRNKVSVYNERVDDLNTVTQQRDDIKKQY
DELRKKRLDEFMAGFNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKS
WKNIANLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDA
QFIIISLRNNMFELADRLVGIYKTDNCTKSITINPNSFVVCEKAA
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggggatggaaacgaaggatgagttcgcgactcgcgaaccagaccgggcccaagtggga
tctcgaggaccgaggttagtaattaacgagatggtgatgaggaacttcaaatcttatgcc
ggtgaacagcgcgtcggtccctttcacaagagcttttctgctgtggttgggccaaatgga
agtggtaaaagcaatgtgatagatgccatgctttttgtatttgggaagagagcaaagcag
atgcggcttaataaagtttctgagcttattcacaattcaactaatcatcaaaatcttgat
agtgctggtgtttctgttcattttcaggagattattgatctggatgacgggacatatgaa
gctgttccaggaagtgaatttgttatttcgcgggttgcatttcgggataactcatccaaa
tattacatcaataaccgtgctagtaactttacagaagttacaaagaaattgaaagggaaa
ggagttgatcttgacaacaatcggtttcttattcttcagggtgaggttgagcaaatttcg
ctcatgaagccaaaagcacaagggcctcatgatgaaggtttccttgaatatttggaggac
ataataggaacaaacaaatatgttgaaaagattgacgaatcatctaaggagttagaaagt
ctcaatgaaaaacgatcaggtgttgtgcaaatggttaaattagcagagaaagaaagagat
agcttggaggatgttaagaatgaggcagaagcgtacatgttgaaagagctttctctcctg
aaatggcaagagaaagctgcaaaattggcccatgaagataccagtttgaaaatggtagaa
ttacgagaaaacgtgtccaacgtagaagaaaatttgaagaataaaagggaagagattcag
gagagcagtaagaggttgaaggagattgagtctgtgcataacaagcacctgataagaaaa
gaggaacttgataatgatttgagaacctgtaaggaagaattcaaggagtttgaaaggcag
gatgtcaaatacagggaagatttgaagcatatgaaacagaagctaaagaaactagaggat
aaacttgaaaaggattcttcaaaaattgaggatgtgtcaaaggagtgtgagaactcaaaa
aatcttatcccaaaacttgaggagaacattccgaagctccaaaagcttttgctggatgag
gagaaagtcctagaagaaatgaaagagaattctaaagttgaaactgagaaatatcgctct
gagctttcaaaggttcgtgctgaattagaaccttgggaaaaggagttgattgtgcataag
ggaaagcttgaagttgctcacactgaacgtaaccttctaactcaaaagcatgaagctgct
aatacagcttttaaggatgctcaaaaagagatggacaacatattgggaaaaactgaaact
ataactgctgccgttaaagataagcaaactgatctggaaaagaacaagcttggagcattg
gaagcacgcaaattggaacagacatgcatcaaagaacaagaagcattgattcctcttgaa
caagtggcaagagagaagtttgcagaactgaagtcagtgcttgattctgagaagagccag
ggatcagttctaaaagcgattttgcaggctaaagaatccaaacaaattgagggaatatat
ggcaggatgggtgatttaggtgctattgatgcaaagtatgatgttgccatctcaactgca
tgtcctggacttgattatattgtggtggaaaccactgctgcagcacaagcatgtgttgaa
ctactccgtagggagcaacttggtattgcaacgttcatgattctggagaaacagcttgac
cttctagagaggtcaaaggagaaagtaagaacccctgagggagttccacgtctctatgac
ttgattaaagttcaggatgaaagaataaaacttgctttctatgctgccttgggtaacacc
attgtagcaaaggatcttgatcaggcaacacgtatagcatatggtggaaacaaagaattt
cgacgtgtggtaacacttgatggtgctctatttgaaaaatctggtaccatgagtggagga
ggaagcaagccacgtggtggtaagatggggacatctattcgagctgccagtgtgtctaga
gaaactgttgttgctgctgagaaggagcttgctaatatggttgattcattaaataacatc
aggcaaagaattgctgacgcaacaaggtgctaccaagcctcagagaaggtagttgcagag
ttggatatggagatagctaaaagccaaaaagaggttgacagcttgaattcggaatataaa
tatcttgaaaagcaacttgattccttggaggctgcatcacggccaaagaaggatgaaatt
gatagactggaggaacttaagaagataatttctacagaagaaaaagagattgataggctc
atccaagggtctaaaaagttgaaggaaaaggcttcagatctgcagaataaaatagaaaat
gctggtggtgaaaagttgaaaacacaaaagtccaaagttgaaaagatacaatctgatatt
gacaagaacagcacagagatcaaccgtcacaaggttcaaatagagactggtgagaaaatg
gtgaagaaattaacaaaggggattgaggaatcaaagaaggagaaagaacgaatcattgag
gggaaggataagatgcatggcatgtttaaagaaatagagcagaaggcctttacagttcaa
gataattataagaaaatgcagaaggtaatcaatgaacatggagaagtgctggagaagtca
aaattggagtatgaaaaagtgaaaaagaatgttgatcagttgcgtgcatcagaggtggat
gctgacttcaagttgcaagacatgaaaaagatgtataaggaattagaaatgaaggggaag
ggctacaagaaaaagctcaatgacttggaaatcagtctacaaaagcatatggaacagata
cagaaagatcttgtagacacagaaaagcttcaagcaactttggctgatgagaccttgact
gaggcctgtgacctaaaaagggcccttgaaatggtgactttactggagacacagctgaaa
gagatgaatcccaaccttgattcaatatcagaatatcgaaataaggtatcagtgtacaat
gaacgagttgatgatcttaacacagttacccaacaacgtgatgatataaagaagcaatat
gatgagttgagaaagaaaaggttggatgagttcatggcaggattcaatgcaatatctttg
aagttaaaggagatgtatcagatgatcaccctcgggggagatgcagaacttgaactagtg
gactctttggatccattctcggaaggtgttgttttcagtgttcgacctccgaagaaaagc
tggaagaacattgcaaacttatcgggtggtgaaaagacactcagctcgttagctctggtt
tttgctcttcatcattacaaaccaaccccactttatgtaatggatgaaattgatgcagct
ctagatttcaagaatgtttccattgttggacattacgtcaaagatcggacaaaggatgca
cagtttataatcataagtttgaggaataacatgtttgagttggctgatcgacttgttgga
atctacaaaactgataattgtacaaaaagcattacaatcaatcccaacagcttcgtggtg
tgcgagaaagctgcatga
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