Gossypium hirsutum (upland cotton): 107899124
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Entry
107899124 CDS
T04793
Name
(RefSeq) polyubiquitin-like isoform X1
KO
K08770
ubiquitin C
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
107899124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107899124
Ubiquitin system [BR:
ghi04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
107899124
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
TBK1_ULD
DUF2604
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
107899124
NCBI-ProteinID:
XP_040966690
UniProt:
A0ABM3BI19
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Position
A04:complement(3343967..3359046)
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AA seq
685 aa
AA seq
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MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
ADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTID
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVESSDTVDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLADYNIQKESTLHLVLRLRGGF
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaacccttactggtaagaccatcacccttgaggtagaaagttct
gatactatcgataatgtcaaggctaaaatccaagacaaagaagggattcctcctgaccaa
caaaggcttatctttgccggaaaacaacttgaggatggccgaactcttgctgactacaat
atccaaaaggagtccaccctccacctagtgcttcgtctaaggggtggcatgcagatattc
gtgaaaactcttactggcaagaccatcaccctcgaggtggaaagttctgatacaattgat
aatgtcaaggccaagatccaagacaaggaagggatcccaccagaccaacagaggcttatc
tttgccggtaaacagcttgaagatggccgaactcttgcggattacaacatccagaaagag
tctaccctccaccttgtccttcgtcttaggggtgggatgcagatttttgtaaaaaccctc
actggaaaaactattacgttggaggtggagagttctgatacgattgataatgttaaggcc
aagattcaggataaggaagggatcccaccggaccagcagaggttgatttttgctggaaag
cagcttgaagatggccgaactcttgcggactataacattcagaaggaatcgaccctccat
ttggtgttacgtctccgtggtggcatgcaaatttttgtgaagactctcaccggaaagact
attactttggaagttgagagttctgacaccattgacaatgtaaaagctaagatccaggac
aaggaagggattccaccagatcagcagaggttgatttttgctggcaaacagctcgaagat
ggtaggacacttgcagattataatatccagaaagagtctaccctccatttggtgttacgt
ctccgtggtggcatgcaaatttttgtgaagactctcaccggaaagactattactttggaa
gttgagagttctgacaccattgacaatgtaaaagctaagatccaggacaaggaagggatt
ccaccagatcagcagaggttgatttttgctggcaaacagctagaagatggtaggacactt
gcagattataatatccagaaagagtctacccttcacttggtgctccgactgcgtggtgga
atgcagatttttgtgaaaactttgactggaaaaactatcacattggaggtggagagctca
gacacaattgataatgtgaaggccaagatccaagataaggagggtatcccacctgaccag
cagaggttgatttttgctggaaagcagctcgaggatgggaggacacttgcggattataac
atccagaaagagtctacccttcacttggtgctccgactgcgtggtggaatgcagattttt
gtgaaaactttgactggaaaaactatcacattggaggtggagagctcagacacaattgat
aatgtgaaggccaagatccaagataaggagggtatcccacctgaccagcagaggttgatt
tttgctggaaagcagctcgaggatgggaggacacttgcggattataacatccaaaaggaa
tcgaccctgcatttggttttgcgacttcgaggagggatgcagatattcgtgaagaccttg
accggtaaaaccatcaccctggaggtcgagagctcggacaccgttgacaatgtgaaagcg
aaaattcaggacaaggaggggattcctccagaccagcagaggttgatttttgctggaaag
cagcttgaggatgggaggacacttgcagactataacatccaaaaggaatcgaccctgcat
ctagttttacgacttcgaggagggatgcagatattcgtgaagaccttgaccgggaaaaca
atcaccctggaggtggagagctcagacacgatcgacaatgtgaaagcgaaaattcaggac
aaggaggggattccaccagaccagcagaggttgatatttgctgggaagcagttggaggat
ggtcgaactctagctgactacaatatccagaaggagtccacactgcatcttgtccttcgc
ctccgtggtggtttctaa
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