Gossypium hirsutum (upland cotton): 107900816
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Entry
107900816 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: GTPase LSG1-2
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
107900816
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107900816
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
GTPases
107900816
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
XFP_C
Nre_N
AIG1
Dynamin_N
Motif
Other DBs
NCBI-GeneID:
107900816
NCBI-ProteinID:
XP_016682060
UniProt:
A0A1U8IVD7
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Position
D09:complement(38723926..38728781)
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AA seq
590 aa
AA seq
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MGKNEKSGVGRALVKHHNAMIQQSKEKGRFYKSQHKKVLESVTEVSNIDAVIEQAEEADQ
LFSIHHPTPNPLINLDVSSSISDMTPEERREQQKKEEALHASSLRVPRRPPWTAAMSVEE
LDANEKQAFLVWRRSLARLEENEKLVLTPFEKNLDIWRQLWRVLERSDLLVMVVDARDPL
FYRCPDLEEYAKEIDEHKRTLLLVNKADLLPVSMRKKWAEYFRLHKVLFVFWSAKAATAE
LEGKLLDHWKMQNNMRKSDDPETKIHGRDELLARLQYEAEEIVKMRKSASDTSTSSNIHS
PRNNAEGTSAPKSVMVGFVGYPNVGKSSTINALVGQKRTGVTSTPGKTKHFQTLIISDEL
TLCDCPGLVFPSFSSSRYEMIASGVLPIDRMTEHXEAVQVVANRVQRHVIEDVYKIKLPK
PKPYESQSRPPQASEFLRAYCASRGYVASSGLPDETRAARQILKDFIDGKLPHYEMPPGM
SAEDGVEDDGNPSLSEVLNSDASDVEDSLENGTETTPVSEHVLDDLSSFDLANGLVSKKA
TVKKSNASHKHHKKPQRKKDRSWRVGNDDEDGMPVTRVFQKPVNSGPLNG
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaacgagaagtcaggggtagggagagccctggtgaagcatcacaatgcaatg
atacaacaatccaaagagaagggaaggttttataagagccaacataagaaagtattggaa
tcggtaaccgaagttagcaacatcgatgctgtcatcgagcaggctgaggaagctgatcaa
cttttctctatccaccaccccacccctaaccccctcatcaatttggatgtgagctcaagc
atcagcgatatgacacctgaagaaagaagagaacagcagaagaaagaggaagcactgcat
gctagcagtctccgagttccgcgcaggccaccatggactgcagcaatgtctgttgaagag
ctagatgccaatgagaagcaagctttcttagtttggcgccggagcttagcaagactcgag
gagaatgaaaagcttgttctcactccatttgagaagaacttggatatctggaggcagctt
tggcgggtccttgaacgcagtgatttgcttgtgatggttgttgatgcaagggaccctctg
ttttaccgctgtcctgatcttgaggaatatgcaaaagagattgacgagcacaagagaaca
ttgcttcttgtaaacaaggcagatcttctgccagtttctatgaggaaaaaatgggcagaa
tattttcgcttgcataaggttctctttgtattctggtctgctaaagctgctactgctgaa
ttagaaggaaaactgcttgaccattggaagatgcaaaataacatgcgaaagagtgatgat
cctgaaacaaaaatacatggtagagatgagctcttggctcgtttgcagtatgaggcagag
gaaatagtcaaaatgaggaaatcagcctctgatacctccacgtcatccaatattcattct
cctagaaacaatgctgaaggaacttcagcaccaaaaagtgtgatggtgggatttgtgggg
tatcctaatgttgggaaaagctcaactataaatgctttggttgggcagaaacgtacaggt
gtcacctccactccggggaagacaaagcatttccagacgttaataatttcagatgagctg
actctatgtgattgtcctggattggtgtttccatccttctcaagctcaagatatgagatg
attgcttcgggggtgttgccaattgacaggatgacggagcacnaggaggctgtgcaagtt
gttgctaatagggtccaaaggcatgttatcgaggatgtatacaagattaaattacccaaa
cccaagccatatgaatcacagtcacggccacctcaggcctcagagtttctgagagcttat
tgtgcttcgcgtgggtatgttgcctctagtggactacctgatgaaactagggcagctcgc
caaattttaaaggatttcattgatggaaagctgcctcactatgaaatgccacctggtatg
tctgctgaagatggggtggaagatgatgggaacccgagcttgtctgaagttctcaattca
gatgcatctgatgttgaagattctttggaaaatggaactgaaactacacctgtgtccgag
catgtactagatgatcttagctcctttgaccttgccaatggacttgtttccaagaaggca
acagttaagaagtcaaatgcatcccataagcaccacaaaaagccccagcggaagaaggat
cgatcatggagagttgggaatgatgatgaggacggaatgccagtaacccgagtcttccag
aagccagtgaattcaggtcctcttaatggttaa
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