Gossypium hirsutum (upland cotton): 107901621
Help
Entry
107901621 CDS
T04793
Name
(RefSeq) chaperone protein ClpB4, mitochondrial-like isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107901621
Chaperones and folding catalysts [BR:
ghi03110
]
Heat shock proteins
HSP100
107901621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
Mg_chelatase
ABC_tran
Zeta_toxin
AAA_7
AAA_24
TniB
AAA_18
Torsin
NACHT
NBD_SMAX1
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
107901621
NCBI-ProteinID:
XP_016683187
UniProt:
A0A1U8IYH6
LinkDB
All DBs
Position
D06:complement(24653304..24659208)
Genome browser
AA seq
980 aa
AA seq
DB search
MASRRLTRSAFSAIKVSKASIPYLFRARAISAAACTLRNSLISPHRSQNFNAVAANNGGF
FSLTRSYHSSPPRYSSATSPAQINQSDYTDMAWEGLVGAVQAAKDSKQQMVESEHLMKAL
LEQKDGLARRIFTKAGLDNTSVLQATDDFISKQPKGAFISLWQVMDTSNPIMGSNLSSLL
DNSRKHKKEMGDNFVSVEHFVLAFTSDKRFGQQLFKNLQLSEQALKDAIKAVRGNQCVTD
QNPEGKYEALEKYGNDLTELARRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVG
KTAIAEGLAQRIVRGDVPEPLLNRKLISLDMGSLLAGAKFRGDFEERLKAVLKEVTASNG
QIILFIDEIHTVVGAGATGGAMDAGNLLKPMLGRGELRCIGATTLNEYRKYIEKDPALER
RFQQVYCGQPSVEDTVSILRGLRERYELHHGVKISDSALVSAAVLADRYITERFLPDKAI
DLVDEAAAKLKMEITSKPTELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLENDLNSL
KQKQKELTEQWDHEKALMTRIRSVKEEIDRVNQEMEAAEREYDLSRAAELKYGTLMSLQR
QLEEAEKNLAEFQKSGKSLLREEVTDLDIAEIVSKWTGIPLSNLQQSERDKLVLLEKELH
KRVIGQDIAVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGFLFNTEN
ALVRIDMSEYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHHDVF
NILLQLLDDGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSTYDSKDAVYNVMKKQV
VELARQTFRPEFMNRIDEYIVFQPLDSKEISKIVELQMVRLKDRLRQKKIYLHYTKEAVE
LLGTLGFDPNFGARPVKRVIQQLVENEVAMGVLRGDFKEEDSIIVDAESLPSVKDLPPQD
KLCIKKLESSSPLDVMVAND
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagaaggctaacaaggtccgctttttcggccattaaagtatcaaaagcctca
attccctacctgtttcgcgctcgcgccatctccgccgctgcttgtactttgcgtaattcc
ctcatttcgcctcaccggtctcaaaatttcaacgcagtggcggcgaacaacggcggcttc
ttctctctcactcgcagctatcactcttcccctccacgttactcttctgccactagccct
gcgcagatcaaccaatcagattacactgatatggcctgggagggccttgttggggctgtt
caagcagcaaaggatagcaaacagcaaatggtggaatctgaacacttaatgaaagctctt
ttagaacaaaaggatgggttggctagaaggattttcacaaaagcagggcttgacaacact
tctgttctgcaggctaccgatgactttatatcgaagcagcctaaaggggcgtttatttcc
ctctggcaggtgatggacacaagtaaccctataatgggatcaaatcttagctccctttta
gacaattctcgaaagcataagaaagaaatgggagataattttgtttcggtggaacatttt
gtcctagcatttacctcagataagaggtttgggcagcagttgttcaagaacctccagctt
agtgagcaggctttgaaggatgccattaaagctgttcgtggaaatcagtgtgtaactgat
caaaatcctgaaggaaaatacgaggcacttgaaaagtatgggaatgacttgactgagctt
gctaggcgtggcaaactagatcctgttattggccgtgatgatgaaataaggcggtgtatc
cagatactatcaagacgaacaaaaaataaccctgttataattggtgagcctggtgtgggg
aaaacagcaattgctgaaggattggctcaaaggattgtacggggagatgttcccgaaccg
ctgttaaaccgaaagttgatctccctagacatgggttccttgttggctggtgccaagttt
cgtggagattttgaggaaaggttgaaagctgtgctgaaggaagttactgcttcaaatggc
cagattattttattcattgatgagatacacacggttgttggtgcaggggctactggtggt
gcaatggatgctgggaatttgttaaagccaatgctggggagaggtgagctgcgatgcata
ggagctactacattgaatgagtacaggaaatacattgagaaggatcctgcacttgagcgc
agatttcaacaagtgtattgtggtcagccatctgttgaagatacagtatcaattcttcga
ggcttgcgtgaacgctatgagctacatcacggtgttaaaatatctgacagtgctcttgtt
tcagcggcagttcttgcagaccgctatataacagaacgttttctgcctgacaaagccatt
gatcttgttgatgaagctgccgcaaagcttaagatggagatcacttctaagcccacagag
ttggacgagatagatagagctgttctgaagttggagatggagaagctatcccttaaaaat
gacactgataaagcatccaaagaaaggttaagcaagctggaaaatgatttgaactcactg
aaacagaaacagaaagaattaactgaacagtgggatcatgagaaggctcttatgactaga
atccgatcagtgaaagaagagattgatagagttaatcaagaaatggaagctgctgaacgt
gagtatgatttaagtcgtgctgccgagcttaaatatggaactttaatgtctcttcaacgc
cagttagaagaggctgaaaagaatcttgctgagttccaaaagtctgggaagtctttgctc
cgtgaagaggttactgatcttgatattgctgaaattgttagcaaatggaccggcatacct
ttatcaaacctccaacaatcagaaagggacaagctagtcttgctggaaaaggaacttcat
aagagagtaattggtcaagatattgcagtaaaatcggtagccgatgcaatcagacgctcg
agggcaggattatctgacccaaatcgtccaatagctagtttcatgttcatgggccccact
ggtgttggcaaaactgagcttgcaaaggctttagctggtttccttttcaatacagaaaat
gctctggtcagaattgatatgagtgagtacatggaaaagcatgcagtttcacgcttggta
ggggcaccaccgggctatgttggttatgaagagggcggacaactcactgaagttgttcgt
agaaggccctattctgtagttctttttgatgaaattgagaaagctcatcatgacgtattc
aatattttgctacagctattggatgatggaaggataactgactctcagggaaggactgtt
agttttacaaattgtgtagtaataatgacttcaaatatcggctctcactacattttggaa
actctccagtcaacatatgacagcaaggatgctgtttacaatgtgatgaaaaaacaggtg
gttgagttggcaagacagactttccgcccggagttcatgaaccggatcgatgagtatatt
gttttccagcctcttgactccaaagaaatcagtaaaatagttgagttacagatggtgcgg
ttaaaagatagactgcgacagaagaaaatctatctgcactacacaaaggaagctgttgaa
cttctggggacactgggatttgaccctaactttggagcaaggccagttaagagggtgata
caacaattagtggagaacgaagttgcaatgggagtgttgagaggagatttcaaggaggaa
gactcgatcattgttgatgcggagtccttgccgtcagtgaaggaccttcccccccaagat
aagttatgcattaagaaattggagagcagttctccattagatgttatggttgcaaatgat
tag
DBGET
integrated database retrieval system
