Gossypium hirsutum (upland cotton): 107904473
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Entry
107904473 CDS
T04793
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107904473
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107904473
03036 Chromosome and associated proteins [BR:
ghi03036
]
107904473
Spliceosome [BR:
ghi03041
]
Complex B
Other components
Prp19-related factors
107904473
Complex C
107904473
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
107904473
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
TPR_14
HAT
Suf
TPR_19
TPR_16
TPR_2
TPR_CcmH_CycH
HAT_Syf1_M
TPR_8
TPR_17
Mad3_BUB1_I
BTB_2
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
107904473
NCBI-ProteinID:
XP_016686349
UniProt:
A0A1U8JDM9
LinkDB
All DBs
Position
D11:1922865..1927882
Genome browser
AA seq
705 aa
AA seq
DB search
MASKDADPSLGYLTRKDTEVKLPRPTRVKNKTPAPIQITAEQILREARERQEAEIRPPKQ
KITDPTELADYRLRKRKEFEDLIRRVRWNQSVWIKYAQWEESQKDFNRARSVWERALEVD
YRNHTLWLKYAEVEMKNKFINHARNVWDRAVTLLPRVDQLWYKYIHMEEMLGNVAGARQI
FERWMSWMPDQQGWLSYIKFELRYNEVERARAIYERFVQCHPKVGAWIRYAKFEMKNGEI
VRARNVYERAVEKLADEEDAEQLFVAFAEFEERCKETERARCIYKFALDHIPKGSAEDLY
RKFVAFEKQYGDKEGIEDAIVGKRRFQYEDEVRKNPLNYDAWFDYIRLEESVGSKGRIRE
VYERAIANVPPAEEKRYWQRYIYLWINYALYEELDAGDMERTRDVYRECLKLIPHEKFSF
AKIWLLAAQFEIRQLNLMGARQILGNAIGKAPKDKIFKKYIEIELQLGNIDRCRKLYEKY
LEWAPENCYAWSKYAELERSLTETERARAIFELAITQPALDMPELLWKAYIDFEISEGEY
ERTRGLYERLLDRTKHLKVWISYANFEASAMEENDESSDLPQDGVEEYNHEAKKECVQRA
RRVFERAVNYYRTSAPELKEERAMLLEEWLKTESSFGELGDISIVQSKLPKKLKKRKQIT
SEDGGVTGYEEYFDYVFPEENQATNLKILEAAYKWKKQKITSDDE
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggcatccaaagatgctgacccttcgctcgggtatttgacccgtaaagacacggaggtc
aaactccctcgaccgacccgtgtcaaaaataaaactccggcaccaatccagattaccgcc
gaacagatcctccgagaagctcgagaacgtcaagaggcggaaatccggccgcctaagcaa
aagattacggacccaactgaactcgccgactatcgcctccgcaaacgcaaggagttcgaa
gacctaattcgccgcgttcggtggaaccaaagtgtttggatcaagtacgcccaatgggaa
gagtctcaaaaggacttcaatcgagcgaggagcgtgtgggagcgcgctctggaagtcgat
taccggaaccacacattgtggttgaaatacgccgaagtggagatgaagaacaagttcatc
aaccacgcgaggaatgtttgggaccgtgccgttacgctcctcccgcgcgtggaccagctt
tggtacaagtacatccacatggaagaaatgttagggaatgtcgccggagctcgccagatt
ttcgaacgctggatgtcgtggatgcctgaccaacaaggttggctttcctacatcaaattc
gagctccgttacaacgaagtcgaacgcgcccgtgcaatttacgaacggttcgttcagtgc
caccccaaagtcggagcttggattagatatgccaaattcgagatgaagaatggggagatt
gtacgggctaggaatgtgtacgaacgtgcggtggagaagctggcggatgaagaagatgca
gagcagttattcgttgcattcgccgaatttgaggaacggtgtaaggaaacggaacgagct
cggtgtatttacaagtttgctctcgatcatatacccaaaggtagtgcagaggatttgtat
agaaagtttgtggcttttgagaagcaatatggagataaggaagggattgaggatgccatt
gtggggaagaggaggtttcagtatgaggatgaagtcaggaagaatccattgaattatgat
gcttggtttgattatataaggttggaagagagtgtaggcagtaaggggaggattagggag
gtttatgagagagctattgctaatgttcctccagctgaggagaagcgatattggcagaga
tatatttacttgtggattaattatgctttatatgaggagcttgatgctggggatatggag
cggacgagagatgtgtacagggagtgccttaagcttattccacacgagaagttttctttt
gcaaagatctggcttcttgctgcacagtttgaaataagacagctcaatctcatgggtgcg
cggcaaatcttgggaaatgctattggaaaggcacctaaagataagatctttaagaagtat
attgaaattgagctgcaacttggtaatattgaccgttgccgaaaactgtatgagaagtat
ctggagtgggcacctgagaactgctatgcatggagcaaatatgctgagttagaaagatca
ttaactgaaacagagcgggcaagagctatttttgagcttgccatcacacaaccagctttg
gacatgccggagttattgtggaaggcatacatagattttgaaatttctgaaggtgaatat
gaacgaactagaggattgtacgagagactattagatcgcacgaagcacttgaaggtgtgg
attagttatgcaaactttgaagcctctgcaatggaggagaatgatgagagttcggacttg
ccacaagacggggttgaggaatataatcacgaagcaaagaaggaatgtgttcagcgtgca
agaagagtctttgaaagagcagttaactattatagaacgtcagcaccagagctgaaagaa
gagcgggctatgctcctggaagagtggcttaaaacggaaagcagtttcggtgagcttggt
gacattagcatagtccagtctaagttgcctaaaaaactcaaaaagaggaagcaaattacg
agtgaagatggtggtgttactgggtatgaagaatacttcgattatgtattccctgaagaa
aaccaggcgacgaacctcaagattttggaagctgcatacaaatggaaaaaacaaaagatt
acttcagatgatgagtag
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