Gossypium hirsutum (upland cotton): 107914621
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Entry
107914621 CDS
T04793
Name
(RefSeq) transcription initiation factor TFIID subunit 1
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
107914621
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ghi01001
]
107914621
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107914621
03036 Chromosome and associated proteins [BR:
ghi03036
]
107914621
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
107914621
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
107914621
Protein kinases [BR:
ghi01001
]
Serine/threonine kinases: Other
TAF1 family
107914621
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
107914621
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
107914621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3591
Bromodomain
TBP-binding
ubiquitin
Rad60-SLD
zf-CCHC_6
HTH_3
Motif
Other DBs
NCBI-GeneID:
107914621
NCBI-ProteinID:
XP_016699066
UniProt:
A0A1U8K996
LinkDB
All DBs
Position
D10:21906869..21925749
Genome browser
AA seq
1893 aa
AA seq
DB search
MGHSSFQDEDDDEEEYEEEAGGSNRLLGFMFGNVDNSGDLDADYLDDDAKEHLAAVADKL
GPSLTDIDLSEKSPHPPADAADQDYDEKYENAIDYEDIDEEYEGPETQAATEEDHLLPKK
EYFTADVSSALEPKTSVFDDENYDEDEESEEVVVEPEEHLAATFEVGKSPGHDVHCGSSD
SEDQVDGTEDLQEEPDAPEEPLDSKGSTPLPVLCVEDGMVILRFSEIFGIHEPLKKAAKR
DRGYFTHREKYKSMDASDLVEEDEEVFLKDAGQGFSFIGWENAIQQDRSEFTDDALVKGG
LEISEHSEEHVKDSYSNPEAMKEGVVVNLSSGLQSPSRPRFFPLDQLDWEEQIVWDNSPA
RSGNSLESPEISVSDLEASVSRETIPEAGQNLLSEQSTESYKKDHDSGLCHSSIVLEPFD
SKTSSGPMDLPFLESRFHPQLLRLESQLRVDSLNDSDGKTDVTMDPDKSDVMKCFRKLTL
QNTDITEGSWLDNIIWEPHSVIAKPKLILDLQDEQMLFEILDNNESKHLQLHAGAMVIAR
SAKPSSRSSEVSDHKHQSGWQFNIANDKFYLNRKVSQQLQSNPNKRMAHGVRVHHSAPAL
KLQTTKLKLSNKDLANFHRPRAIWYPHDIEVAVRQQGRLPTQGPMKVILKSLGGKGSKLH
VDAEETVSSVKAKASKKLDFKPSETVKIFYLGKELEDDMSLAAQNVPPNSLLHLIRTRIH
LWPRAQKLPRENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGANLCTYH
QKKSSGDQTSGLLCNGNETLGNVLLLEPADKSPFIGDIKAGYSQSSLETNMYKAPIFSHK
VPSTDFLLVRSPKGKLSIRRIDRIAVVGQQEPLMEVFAPGSKNIQTYLMNRMLVYVYREF
SASAKRGLIPFMGTDELFTHFPNLSDAIVRKKLKECAYLRRDKNGRQIWSMKPDFHIPPE
GVLRKLVSPEHVCAYESMQAGLYRLKHLGITRLTTLTSVSSAMSQLPDEAIALAAASHIE
RELQITPWNLSSNFVACTSQDRDNIERLEITGVGDPSGRGLGFSYVRTAPKAPVSNAVMK
KKTAAARGGSSVTGTDADLRRLSMEAAREVLLKFNVPDEVIAKQTRWHRIAMIRKLSSEQ
AASGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVDGEENESDSEAN
SDLDSFAGDLENLLDAEEFEEGEEGNNNNNVDKADAVKGLKMRRRPYKAQAEEEIEDEAA
EAAELCRLLMDDEDDQKKKKKKKNKAVTEDAGLTFGLQPRIGVESLQCVKKTSIIPKQIV
RSTQSNGSYPMNENIVKDTKDIESRIFKGSVSGKLKGMKKNGMPNTGPLTKVKILGDNVK
LFKEKKSSRETFVCGACGQLGHMRTNKHCPKYGEDPETQVEATELEKTPGKSTSLEPSGQ
SQLKMMKKKLITKSATKIAVVEASEGEKSSTNTKALPLKFKCSTDRPSDKLTSGGTQSSD
IPVTSDPENGAKSAAKVSKIIISNRAKPDEMQVESHNVPVVIRHQVDIDRGQAESHKKSI
VIKPPTNMERDQVEPHKPSVVIRPPADKDKDQPQKKIIIKRPKEIIDLDQLSQEGGTYPE
YRKTKKIVELSSFEKHGKQESLRLMEPKARRKAKEERRWWEEEEKRRNVERIREDRARKL
YEEEMRLLEERERFAEITRYTEDIRREREEEERQKAKKKKKKKAEIKEDYLEDYRTRRND
RRAPERDRGAKRKPVELGRYGAEYVPPTKRRRGGEVGLANILERIVETLRDNTEVSYLFL
KPVSKKEAPDYLNIVKHPMDLSTIRDKVRRMEYKNQEEFRHDVWQIAYNAHIYNDGRNPG
IPPLADQLLELCDYLLHEYSDNLAEAEAGIGEA
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atgggtcactctagcttccaagatgaagatgacgatgaagaagaatacgaggaggaagct
ggtgggagtaatcgacttctgggttttatgtttgggaatgtcgataactccggtgatctt
gatgctgattatcttgatgacgatgcaaaggaacatctcgctgcggtagcagacaagctg
ggtccatctcttacagatatagatttgtcagaaaaatcaccgcaccctccagctgatgcc
gctgaccaagattatgatgagaagtatgaaaatgctattgactatgaagatattgatgag
gagtatgaaggtccagagactcaagctgctactgaggaggaccatttacttcccaaaaag
gaatattttactgctgatgtttcttctgctttggagcctaaaacctccgtgttcgatgat
gaaaattatgacgaggatgaggaaagtgaagaggtggtagttgagccggaagagcatctt
gcagcaacatttgaagtggggaaatctcctgggcatgatgtacattgtggctcttcagac
agtgaagatcaagtagatggtactgaagatcttcaggaggaacctgatgctccagaagag
ccgttggattctaaaggttccacacctctgcctgttttatgtgtagaagatggtatggta
atcttacggttttcagaaatatttggtatccatgagcccttgaagaaagctgccaaaaga
gaccgtggctatttcactcatagagagaagtacaaatctatggatgcttctgatcttgtt
gaagaggatgaagaggtgtttctaaaggacgctggtcaaggtttctcatttattggttgg
gaaaatgccatccaacaagatagatctgaatttacggatgacgctttggtgaaaggaggc
ttggaaatttctgaacatagtgaagagcatgttaaggatagttattcaaatccagaggca
atgaaagagggggtagtagtaaatctttcttctgggttgcagtcaccttcacgtccgagg
ttttttcctcttgatcagttggactgggaagaacaaattgtttgggacaattcacctgca
agaagtggcaattctttggagagtcctgaaatctctgtctctgatttggaggcgtcagtt
tcaagagagaccattccagaggcggggcaaaatctactttctgagcagtctacagaatcc
tataagaaggaccatgatagtggcctttgtcattcctctattgtcttggaaccgtttgac
tcgaaaacttcttcaggacctatggacctgccattcttggaaagcagattccatccccaa
ctcttgaggctggaatcgcagttgagagtagattccttaaatgattctgacggtaaaaca
gatgttaccatggatccagataaaagtgatgtgatgaagtgttttagaaaacttacattg
caaaacacagatataactgaagggtcatggttagacaatattatatgggaaccacatagt
gttattgcaaagcctaagctaattcttgatcttcaagatgaacagatgctttttgaaatt
ttagataacaatgaaagtaaacatcttcaacttcatgccggggccatggtcattgctcga
tctgcaaagccaagcagtcgttcttccgaggtctcggatcataaacatcaatctggttgg
caattcaatattgctaatgataagttctacttgaaccgtaaagtttctcagcagttacaa
tcaaatcctaataaacgcatggctcacggtgtcagagttcatcattcagcacctgcactt
aaacttcaaacaacgaagttgaagttgagcaataaagatttagcaaattttcaccgccca
agagcaatatggtatccgcatgacatcgaggtggctgtcaggcaacaagggaggctgcca
acacaaggacccatgaaagtcatattgaagagtttgggaggcaaaggtagcaaactacat
gttgatgctgaggaaacggtctcttctgtaaaagcaaaggcttctaaaaagctagatttc
aagccatcagaaacagtgaaaatattttatcttgggaaggagcttgaagacgatatgtct
cttgctgcccaaaatgttcctccaaattctctgcttcatcttattcgcacaagaatacat
ttgtggccaagggcacaaaaacttccgcgagagaataagtctttacggcctcccggagca
tttaagaaaaaatctgatctttctgtgaaagatggtcatgtctttcttatggagtactgt
gaggagaggcctttacttttgagcaatgtggggatgggtgcgaacttgtgcacctaccat
cagaaaaaatcttctggtgatcaaactagtggattgttatgcaatggaaacgaaaccttg
ggaaatgttctgcttctagagccagctgataaatcaccttttattggagatatcaaagct
ggctatagccagtcatctctagaaacaaacatgtacaaggctcccatattttcccacaag
gtgccatcaactgacttcctattggttaggtcaccaaagggaaagctttccatacgacgt
attgataggattgctgttgtaggacaacaggagcctctcatggaggtatttgctcctgga
tcaaagaatattcagacatatcttatgaacagaatgctggtttatgtgtatcgggagttt
tccgcgtctgccaaacgtggtttgatcccattcatgggtacagatgagttgtttactcat
tttcctaacctttcagatgcaattgtccggaaaaagctgaaggaatgtgcttatttgcgg
agggataaaaatggacgacagatttggtccatgaagccagatttccacattccacctgaa
ggcgttcttaggaagttggtgtctccggagcatgtatgtgcctatgaaagcatgcaagct
ggcctgtatcggcttaaacatttaggaattacacgacttacaactcttaccagtgtttca
tctgcaatgagtcaactccctgatgaagctatagctctggctgctgcatcacacattgaa
cgggagctgcagataactccatggaatctgagtagcaattttgttgcatgtacaagccag
gacagagataatattgagcgcctggagataactggtgttggtgatccttctggtcgaggt
ttaggatttagctatgtccgtaccgctccaaaggctcctgtgtcaaatgctgtgatgaag
aagaaaacagcagctgctcgtggaggttctagtgtgactggtacggatgctgacctccgc
agattaagcatggaggcagcacgagaggtacttttgaagttcaatgttcctgatgaagtg
attgcaaaacaaactaggtggcaccgtattgcaatgatacgcaagctctcaagtgagcaa
gctgcatcaggagtcaaggttgatccaacaactataagcaagtatgcacggggacagcga
atgtcctttcttcagttacaacagcaaaccagagaaaaatgtcaggaaatatgggatcgc
caaattcagtctctttcagctgttgatggtgaagaaaatgaaagtgattctgaggcaaat
agtgatcttgattcctttgctggcgacctagaaaatttgcttgatgcagaggaattcgaa
gaaggggaagaaggtaacaacaataacaatgttgacaaagcagatgctgttaaggggctc
aagatgagaagacgtccctataaggctcaggcagaagaagaaattgaagatgaagctgct
gaagctgctgaattatgtcgtttactcatggatgatgaggatgaccaaaagaagaaaaaa
aagaagaaaaacaaagctgttacagaagatgctgggttgactttcggcttacaaccacgc
attggtgttgagagtttacaatgtgttaagaaaacaagcataattcccaagcaaattgtt
cgttctactcaatctaatgggtcatatcctatgaatgagaatattgtcaaggatacaaag
gatattgaaagtagaatttttaaagggagcgtgtcgggaaagttgaaaggaatgaaaaaa
aatggtatgccaaacacaggtccattaactaaagtcaaaatattgggagacaatgttaag
ttgttcaaggagaagaaatcatctagagaaacttttgtctgtggagcttgtggtcagctt
ggacacatgaggaccaacaagcactgccccaagtatggagaagatccagaaacgcaggtt
gaagctactgagttggaaaaaactccagggaaatcaacttcgctagaaccctctggtcag
tcccaattgaagatgatgaaaaagaagctcataactaaaagtgcgacaaagatagcagtt
gtagaagcttcggagggtgaaaaatctagtacaaacacaaaagctcttccattgaaattc
aaatgctctactgataggccgtctgataaacttacttctggagggacacaaagttctgac
attccagtcacttctgatccagaaaatggagccaaatctgctgccaaggttagtaaaata
attatttccaacagggctaagcctgatgaaatgcaggttgagtctcataatgtgcctgtt
gttatacggcatcaagtggatatcgatagaggccaagctgaatcccataagaaatctatt
gttataaagccaccgacaaacatggagagggaccaagttgaacctcataaaccctctgtt
gtcatacgcccaccagcggataaagataaggatcaacctcaaaaaaaaattataatcaag
cgaccgaaggaaattattgatttggatcaacttagtcaagagggaggcacttatcccgag
tacaggaaaacaaaaaaaatagttgaattgtcaagctttgagaagcatggaaagcaggaa
agcttgcgattaatggagccaaaagcaagacggaaagctaaagaggagagaagatggtgg
gaagaggaagagaagaggagaaatgtggagagaataagagaagacagggcaaggaagctt
tatgaggaagaaatgagactgctggaagagcgagaaagatttgctgagatcacaagatac
actgaagacattcgaagagagagggaggaagaggaacgccaaaaagcaaagaagaaaaag
aagaaaaaggctgaaataaaagaggattatttagaagactacaggacaagaagaaatgac
agaagagcaccggaaagagatcgaggtgcaaaaaggaaacctgttgagttaggacgatat
ggtgcagagtatgtccctccaacaaagcggcgcagagggggagaggttggtttggccaac
atcttagagcggattgtagaaacacttagagataataccgaggtgtcctatctgttctta
aaaccagtgtccaagaaggaggcccctgactacttgaacattgtaaagcacccaatggat
ttgtccacaataagggacaaggttaggcggatggaatacaaaaatcaagaagaatttagg
catgatgtatggcagattgcctacaacgctcatatctacaatgatggtcgtaatcctggt
attcctcctcttgccgatcagcttttggagctttgtgactacttgctacatgagtattct
gataacttggctgaagctgaagcaggtataggggaagcttaa
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integrated database retrieval system
