Gossypium hirsutum (upland cotton): 107914762
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Entry
107914762 CDS
T04793
Name
(RefSeq) protein transport protein SEC23-like
KO
K14006
protein transport protein SEC23
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107914762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107914762
Membrane trafficking [BR:
ghi04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
107914762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
107914762
NCBI-ProteinID:
XP_040958208
UniProt:
A0ABM3ATL9
LinkDB
All DBs
Position
D10:25895326..25903037
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AA seq
771 aa
AA seq
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MSEMANMDSEGIDAVRMTWNVWPRTKVEASKCVIPLAASIAPIRPHTDIPMLPYAPLRCK
TCSAVLNAFARVDFMAKIWICPFCYQRNHFPPHYAMISETNLPGELYPQYTTVQYALQSF
PDPNNSNATQLPPVFVFVLDTCMIEEELEFVKSALKQAIGLLPEHALVGFVSFGTQVQVH
ELGFSDMSKVYVFRGSKEISREQVLEQLGLGSAGRRPTVGYPKVLQNGYANTGVNRFLLP
ASDCEYTLDTLLDELQTDQWPVQAGHRASRCTGVALSVSAGLLAACLPGTGARIIALVGG
PCTEGPGTIVSKDLSEPVRSHKDLDKDAAPYFKKAVKFYDSIAKQLVSQGHVLDLFASAL
DQVGVAEMKVAVERTGGLVVLAESFGHSVFKDSFKRVFEDGEHSLGLCFNGMLEINCSKD
IKIQGVIGPCTSLEKKGPNVADTVIGEGNTTAWKMCGLNKSTSLTVLFDLSSTERSNVPG
AANSQFYLQFLTSYQDPEGKTMLRVTTVTRQWVDSTVSSEELLRGFDQETAAVVMARVTS
LKMETEEGFDATRWLDRNLIRLCSKFGDYRKDDPSSFTLNPCFSLFPQFMFNLRRSQFVQ
VFNNSPDETAYFRMLLNRENITNAAVMIQPSLISYSFNSLPQPALLDVASISADRILLLD
SYFSIVVFHGMTIAQWRNMGYQNQPEHQAFAELLQAPQADAQMIIQERFPVPRLVVCDQH
GSQARFLLAKLNPSATYNNSSDIAAGSDIIFTDDVSLQVFFEHLQRLAVQS
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaatggcgaacatggattccgaagggatagatgccgtacggatgacgtggaac
gtttggccacgcactaaagtggaagccagcaagtgtgtcattccgttggctgcttcaatc
gctccgatccgtccacacacggacattccgatgctgccttacgcgccgctgcgatgcaag
acatgttccgccgtcctcaacgccttcgcgcgcgttgacttcatggccaagatctggatc
tgcccgttttgttaccagcgaaaccattttccgcctcactatgccatgatatccgaaacg
aacttgcctggcgaactctatccgcagtataccaccgtgcaatacgcgctccaatcgttt
cccgatcccaacaattccaatgctactcaattgccaccagtgtttgtgttcgtgttggac
acttgcatgatagaggaagagcttgagtttgttaaatcggcgttgaagcaggctattggg
ttgttgccagaacatgcgcttgtcggctttgtttcgtttggaactcaagtccaagtccat
gaattggggttctcggatatgtcgaaggtctacgttttcaggggtagcaaggagatttcc
agggagcaagtgttggagcagttgggcctcggttctgctgggaggcggccaacagtaggg
tatccgaaagtcctgcaaaatggttacgcaaatactggcgttaaccggtttttattgcct
gcttccgattgcgaatacaccctagacacgttgttggatgaattacaaacggatcaatgg
cctgtacaagcggggcacagggcgtcgaggtgtactggagtggccttaagtgtttcagca
ggattgcttgcagcttgcttgcctggaactggtgctaggattattgctttggttggtggt
ccatgtactgaagggccaggcacgattgtatcgaaagacttgtcagaacctgtacgttcc
cataaggatcttgataaggatgctgcaccgtattttaagaaagcagtaaaattttatgat
agtattgcgaagcagcttgtcagccaaggtcatgtacttgacctttttgcatctgcactt
gatcaggttggggttgctgaaatgaaagttgcagttgaaagaacaggtggccttgttgtt
ctagctgaaagttttggtcattctgtattcaaagactctttcaagcgtgtatttgaggat
ggagaacattctcttggcctttgctttaatggaatgcttgagattaactgttcaaaggac
atcaaaattcaaggggtaattgggccttgtacatctttggagaagaaaggacctaatgtt
gctgacacagtcattggggaggggaacactacagcatggaaaatgtgtggcctcaacaag
agtacttccttgacggtcttatttgatctctcatcaactgagcgatcaaatgttccagga
gctgcaaattcacagttctatttgcagtttcttacaagctatcaagaccccgaaggtaaa
acaatgcttcgagtcacgaccgtgacaagacaatgggtagacagcactgttagttcagag
gaattgctacgaggattcgatcaagagactgcagctgttgtaatggcaagagtaacttcc
ctgaaaatggagactgaggaggggtttgatgctacacggtggttagaccggaacctcatt
aggctttgttccaaatttggcgactaccggaaggatgatccatcatccttcactttaaac
ccttgtttttctttgtttcctcagtttatgtttaacctgcggaggtctcaatttgtacag
gtttttaacaacagtccagatgaaactgcctattttcgcatgttgttgaacagggaaaat
attacaaatgcagctgttatgattcaaccatcattaatatcatattcattcaactcgctg
ccccaaccagcattattggatgtggcttccatttcagctgatcgcattctcttgctggat
tcatatttcagtattgttgttttccatggtatgacaatagcacagtggcgcaacatgggt
taccagaaccagcctgaacatcaggcatttgcagagcttttgcaagcaccccaggctgac
gcccaaatgataattcaggaacgattccctgtccctagactggttgtatgtgatcagcat
ggatcccaggcaagatttttattggcaaaattgaacccatcagcaacatacaataattcc
tcagatatagctgctggatcggatataatctttactgatgatgtaagtttacaagtcttc
ttcgagcatcttcagaggttggctgtgcaatcttga
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