Gossypium hirsutum (upland cotton): 107921254
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Entry
107921254 CDS
T04793
Name
(RefSeq) meiotic recombination protein SPO11-1
KO
K10878
meiotic recombination protein SPO11
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ghi03036
]
107921254
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
107921254
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TOP6A-Spo11_Toprim
TP6A_N
JetD_C
Motif
Other DBs
NCBI-GeneID:
107921254
NCBI-ProteinID:
XP_016706619
UniProt:
A0A1U8L0P2
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Position
D01:complement(11842840..11846574)
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AA seq
364 aa
AA seq
DB search
MEGIRSSTRSRDLLRKIKEFTLSILEDLSEGLSPLIFIQSFRTYCTNLDLICSCRSNQPS
GHEILTFQKESHVHRIDVLLRVLLIVQQLLQENKHASKRDIYYMHPLIFSDQSVVDRAIN
DICILLQCSRHNLNVVSVGNGLVMGWLRFFEAGRKFDCINSPNTAHTVPVLVEDVKDLVS
AALYILVVEKESVFQRLENDKFCSKNRCIVITGRGYPDVPTRRFLRLLVDKLCLPVYCLV
DCDPYGFDILATYRFGSMQMAYDAKFLRVPQIQWLGAFPSDSENYDLPKQCLLPLTIEDK
RKTEAMLQRCYLHQEVPDWRSELELMLQRGTKFEIEALSVHSLSFLSEVYIPGKIQEIKS
ICQV
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atggagggaattcgctcaagtactcgctctagagatctgctaagaaaaatcaaagaattt
acgctgtcgatcttggaggatttgagcgaaggactatctccgttgattttcatccaaagc
ttcagaacctactgcaccaatcttgatttaatttgcagttgcaggtctaatcagcccagt
gggcatgaaattcttacatttcagaaggaaagccatgtccatagaattgatgtgttattg
agggtgttattgatagttcaacaacttcttcaagaaaacaaacatgcgtcaaagagagat
atatattacatgcatccattaatattttcagatcagtctgttgtagacagagcaattaat
gacatatgcatccttctgcaatgcagtcggcacaatctaaacgtggtttctgttggaaat
gggttggtaatgggatggttaaggttctttgaagcaggaaggaaatttgattgcataaat
agccccaacactgcccatacagttcctgtgcttgttgaggatgttaaagatcttgtaagc
gccgccctgtatatacttgttgtagagaaagaatcagtcttccaacgattagaaaatgac
aagttttgcagcaaaaaccgttgcattgtcatcacaggaagaggctatccggatgttccc
acaagaaggtttttgcgactgctcgtggacaagttatgtcttcctgtctattgcttggtt
gattgtgatccatatggctttgacatcctggctacttacaggtttggttcgatgcaaatg
gcatatgatgccaaatttctacgagtcccacagatccaatggcttggagcttttccttca
gattctgagaactacgatcttcctaagcaatgtctattgcctttgacaatagaagataag
aggaaaactgaagccatgttacagagatgctaccttcaccaagaagtgccagattggaga
tcggaactagagttgatgttgcaaagaggaactaaattcgagattgaagcattatcggtt
cactcactttctttcttgtctgaggtctatattccaggtaagattcaagaaataaaatct
atttgtcaggtttga
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