Gossypium hirsutum (upland cotton): 107922146
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Entry
107922146 CDS
T04793
Name
(RefSeq) adagio protein 3 isoform X1
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107922146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107922146
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107922146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
Kelch_1
PAS_9
Kelch_6
NANM
PAS_3
PAS
F-box-like
F-box
PAS_4
PAS_8
DUF6739
Motif
Other DBs
NCBI-GeneID:
107922146
NCBI-ProteinID:
XP_040942214
UniProt:
A0ABM2ZIZ6
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Position
D01:44105385..44109610
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AA seq
629 aa
AA seq
DB search
MSKGEEVMQSSGKRQRFAKDEVKRQEMEEQQQQEDDDEEEESQLPKKPGLLYYPTTPTSF
VVSDALEPDFPIIYVNKVFEVFTGYRADEVLGRNCRFLQYRDQCAQRRHPLVDPFVVSEI
RRCLEEGIEFQGELLNFRKDGTPLVNILKLAPIHDDDGIVTHIIGIQVFSEAKLDLNRVS
YPVFKETCNQQLDESAQYSHFSNPPFSQHREICGILQLSDEVLAHNILSRLTPRDVASIG
SVCRRIRQLTKNEHVRKMVCQNAWGREVTGTLEMMTKKLGWGRLARELTTLEAVCWRKLT
VGGAVEPSRCNFSACAAGNRLVLFGGEGVNMQPMDDTFVLNLDAANPAWQRVSVESSPPG
RWGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPTWKEVSGGAPPLPRSWHSSCT
IDGSKLVVSGGCTDAGVLLSDTYLLDLTTDKPTWKEIPTSWAPPSRLGHSLSVYGRTKIL
MFGGLAKSGNLRLRSGEAYTIDLEDEEPQWRQLDCSAFTSVGSQNAVVPPPRLDHVAVSM
PCGRIIIFGGSIAGLHSPSQLFLLDPSEEKPSWRTLNVPGQPPKFAWGHSTCVVGGTRVL
VLGGHTGEEWILNELHELCLASRQDSDSS
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggagaagaagtgatgcaaagcagtggaaaacggcaacgatttgcaaaagat
gaagtaaaacgacaagaaatggaggaacaacaacaacaagaagatgatgatgaagaagaa
gagagccagcttccgaagaaaccaggactattgtattaccctacaactccgacttctttc
gttgtttccgatgctttggagcccgatttccctattatttatgtcaacaaagtcttcgag
gttttcaccggttaccgagccgacgaagtccttggtaggaactgtcggtttttacagtat
agagatcaatgtgctcaaagacggcaccctttggtagatccttttgttgtttctgagatc
cggagatgtcttgaggaaggtattgaattccaaggtgagcttctgaatttcaggaaggat
ggcactccattggtgaacatattgaaacttgcacctatacatgatgatgatggaatagtc
acacacattattggtattcaagtgttttctgaagcaaaactagatctgaatcgtgtatca
tatccggttttcaaagagacttgtaatcagcagttggatgagtctgctcaatactctcat
ttcagcaatccaccattcagtcagcatcgagaaatatgtgggatactccagctctctgat
gaagttttggctcataacattttatctcggttaacaccgagagatgtcgcttctattgga
tctgtctgtagaaggatacgacaattaacaaaaaatgagcatgtgagaaagatggtatgt
caaaatgcctggggaagagaggtcactggtacactggaaatgatgacaaaaaagctggga
tggggacgtcttgccagagagctgaccactcttgaggcagtttgttggaggaaactgact
gtaggtggtgctgtggagccttcacgttgcaacttcagtgcatgtgcagcagggaaccgt
ctagtccttttcggaggcgagggagtcaatatgcagcctatggatgacacgtttgttctc
aaccttgatgctgcaaatccagcgtggcagcgtgtaagtgtggaatcatcccctccaggg
cgttggggccatactctttcatgcctaaatggttcctggttggtggtctttggaggatgt
ggaagacaaggattgctcaatgacgtctttgtccttgacttggatgccaaacaacctaca
tggaaagaagtttctggtggtgctccccctctccctagatcttggcatagctcttgcaca
atagacggttctaagttggttgtgtctggtgggtgcacggatgcgggggtgcttctcagt
gacacgtatctgttggatcttactacagacaagccaacatggaaagagattccgacatca
tgggcacccccatcaaggttgggccattcgctttcagtttatgggcgtactaaaattctt
atgtttggggggcttgcaaagagcgggaacttgcgattgcgatcaggtgaagcctacacc
attgatttggaggacgaagaaccacagtggcggcaactggactgtagtgccttcaccagt
gttggtagccaaaatgctgtggtacctcctcctagactggatcatgttgcggtaagcatg
ccttgtgggaggataattatatttggtggttcaattgcagggttgcactctccttctcag
ctgtttctcctggatccttcggaggagaaaccatcatggaggacactgaatgttcctggg
caaccaccaaaatttgcttggggacatagtacatgtgtggttggagggaccagggtgttg
gtgttgggcggacacacgggggaggagtggatactcaatgagttgcatgagttgtgttta
gcaagcaggcaggactcggactcaagctga
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