Gossypium hirsutum (upland cotton): 107923923
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Entry
107923923 CDS
T04793
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
KO
K14026
SEL1 protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107923923
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Gene cluster
GFIT
Motif
Pfam:
Sel1
Motif
Other DBs
NCBI-GeneID:
107923923
NCBI-ProteinID:
XP_016709607
UniProt:
A0A1U8L4Q2
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Position
A11:268927..273295
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AA seq
756 aa
AA seq
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MTNVNVARMKHLSLSLSLSLSLFLFQSLEWISRFDRLLISCDFFSPPKSQVFFYLFPHQI
QCSDKSSLFPTHTYIIIIIMSRSSCHLFLSLFLLLFSLFPFPLLARPFVLVLSQDDLKDV
QNDDASPLDSDSSWDDDDFGGTHVKPDDELDPGSWRRLFEPPTTLLSPSHDTSLDSYYAA
VQKIISASNNGDARLMEEAAAEIETAANADGDPHARSVLGFLYGMGMMRERNKAKAFLNH
YFAAEGGNAQSKMALAYTYSRQDMHEKAVKLYAELAETAVNSFLISKDSPVIEPIRIHNG
AEENKEALKKSRGEDDEDFQILEYQAQKGNAGAMYKMGLFYYFGLRGLRRDHSKALMWFL
KAVDKGEPRSLELLGEIYARGAGIERNYTKALEWLSLASEHGLYSAYNGMGYLHVKGYGV
EKNYTKAKEYFDKAADNEDAGGHYNLGVMYLKGIGVKRDVKIACKCFIVAANAGQPKAFY
QLAKMFHTGVGLKKNLPMATALYKLVAERGPWSSLSRWALESYLKGDMGKAFLLYSRMAE
LGYEIAQSNAAWILDKYGERSMCMGESGACTDAERHQRAHSLWWQASEQGNEHAALLIGD
AYYYGRGTVRDYERAAEAYKHAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDQALE
LDPAAKLPVTLALASLWVRKNYADSFLVHIIDSLPEVYPRVEEWVENVIMEEGNATILTL
FVCLLTVLYLRERQRRHAIAAAGAHEPNEHVVPAAR
NT seq
2271 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgtaaacgtggcaagaatgaagcacctctctctctctctctctctatctcta
tctctgtttctctttcagtctctggaatggatatctcgattcgaccgtcttctgatctca
tgtgacttcttctccccccccaaatcacaggtattcttttaccttttcccccaccaaatc
cagtgctccgacaaatcctccctgtttccgacacacacctacatcatcatcatcatcatg
tctaggtcaagctgccatctcttcctttccctcttcctcctccttttctcccttttcccg
tttcccctcctcgcccgccctttcgttctcgttctctcccaagacgacctcaaggatgtc
caaaacgacgatgcttcccctctcgattccgattcttcttgggacgacgatgacttcggc
ggtactcatgttaagcctgatgacgagctcgatcctggatcttggcgccgtctcttcgag
ccacctactacccttctctccccttctcatgatacttccctcgattcttactacgccgcc
gtccaaaaaatcatctccgcttccaacaacggagacgccaggttgatggaggaagccgcg
gctgagatcgagaccgctgctaatgcggacggtgatccgcacgctcgttcggtgttaggt
tttttgtacgggatggggatgatgcgtgagagaaacaaagctaaagcatttttgaatcat
tatttcgctgccgaaggtggtaatgcccagtccaagatggctttggcttacacttactcg
cgtcaagatatgcatgaaaaagctgttaaattatatgctgaactggcagaaacagcggta
aacagtttcttgatatccaaagattcgccggtaatagaaccgattaggatacacaatgga
gctgaggagaacaaggaagctttgaagaaatcaagaggtgaagacgatgaagattttcag
atattggaatatcaagcacagaaagggaatgccggtgctatgtacaaaatgggtcttttt
tactatttcggattgagagggttgcgccgtgatcattccaaggctttgatgtggtttttg
aaagctgtggataaaggggagcctaggtctcttgaacttcttggtgagatttatgctaga
ggggctggaattgaaaggaattataccaaggctcttgagtggctttcacttgcatccgaa
catgggctttattcagcttacaatgggatgggctatttacatgttaaaggctatggtgtg
gagaagaactataccaaagcaaaagaatacttcgacaaggctgctgataatgaagatgct
ggtgggcactataatttaggagtaatgtaccttaaagggatcggagtgaagagggatgtg
aagattgcttgtaagtgttttattgtggcagccaatgcaggtcaaccaaaggcgttttat
cagttggctaagatgtttcatactggtgttgggcttaaaaagaatcttcctatggctact
gcattatacaagctagttgccgaacggggaccatggagttccctctctagatgggcactt
gaatcatacctaaaaggtgacatgggcaaagcattcctcttgtattctaggatggctgag
ctaggttacgagatagcacagagtaatgctgcatggatccttgacaagtatggtgagcgc
agcatgtgcatgggtgaatcgggggcttgcacagatgcagaaaggcatcaacgtgctcat
tctttgtggtggcaagcttccgagcagggtaacgaacatgcggcattacttattggggat
gcatattactatggcagaggaactgtgagggattatgagcgtgcagctgaagcttacaaa
catgcaaaatcccaatcgaatgctcaagctatgttcaacctgggatacatgcatgagcat
ggccaaggacttccttttgacctccatcttgctaagcggtactatgatcaggcattagag
ctagatcctgcagcaaagttgcctgtcacactggcactagcaagtttgtgggtacgaaag
aactatgctgacagtttcctggtccacataattgattccctgcctgaagtttatcctaga
gttgaagaatgggtggagaatgtgatcatggaggaaggaaatgcaacaatattgacacta
tttgtctgtctactcactgttctatatctgcgtgagcgacaacgcaggcatgctattgct
gctgcgggggcacacgaacctaatgagcatgttgtacctgctgcacgctaa
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