KEGG   Gossypium hirsutum (upland cotton): 107923923
Entry
107923923         CDS       T04793                                 
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase component HRD3A
  KO
K14026  SEL1 protein
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    107923923
SSDB
Motif
Pfam: Sel1
Other DBs
NCBI-GeneID: 107923923
NCBI-ProteinID: XP_016709607
UniProt: A0A1U8L4Q2
LinkDB
Position
A11:268927..273295
AA seq 756 aa
MTNVNVARMKHLSLSLSLSLSLFLFQSLEWISRFDRLLISCDFFSPPKSQVFFYLFPHQI
QCSDKSSLFPTHTYIIIIIMSRSSCHLFLSLFLLLFSLFPFPLLARPFVLVLSQDDLKDV
QNDDASPLDSDSSWDDDDFGGTHVKPDDELDPGSWRRLFEPPTTLLSPSHDTSLDSYYAA
VQKIISASNNGDARLMEEAAAEIETAANADGDPHARSVLGFLYGMGMMRERNKAKAFLNH
YFAAEGGNAQSKMALAYTYSRQDMHEKAVKLYAELAETAVNSFLISKDSPVIEPIRIHNG
AEENKEALKKSRGEDDEDFQILEYQAQKGNAGAMYKMGLFYYFGLRGLRRDHSKALMWFL
KAVDKGEPRSLELLGEIYARGAGIERNYTKALEWLSLASEHGLYSAYNGMGYLHVKGYGV
EKNYTKAKEYFDKAADNEDAGGHYNLGVMYLKGIGVKRDVKIACKCFIVAANAGQPKAFY
QLAKMFHTGVGLKKNLPMATALYKLVAERGPWSSLSRWALESYLKGDMGKAFLLYSRMAE
LGYEIAQSNAAWILDKYGERSMCMGESGACTDAERHQRAHSLWWQASEQGNEHAALLIGD
AYYYGRGTVRDYERAAEAYKHAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYDQALE
LDPAAKLPVTLALASLWVRKNYADSFLVHIIDSLPEVYPRVEEWVENVIMEEGNATILTL
FVCLLTVLYLRERQRRHAIAAAGAHEPNEHVVPAAR
NT seq 2271 nt   +upstreamnt  +downstreamnt
atgacaaatgtaaacgtggcaagaatgaagcacctctctctctctctctctctatctcta
tctctgtttctctttcagtctctggaatggatatctcgattcgaccgtcttctgatctca
tgtgacttcttctccccccccaaatcacaggtattcttttaccttttcccccaccaaatc
cagtgctccgacaaatcctccctgtttccgacacacacctacatcatcatcatcatcatg
tctaggtcaagctgccatctcttcctttccctcttcctcctccttttctcccttttcccg
tttcccctcctcgcccgccctttcgttctcgttctctcccaagacgacctcaaggatgtc
caaaacgacgatgcttcccctctcgattccgattcttcttgggacgacgatgacttcggc
ggtactcatgttaagcctgatgacgagctcgatcctggatcttggcgccgtctcttcgag
ccacctactacccttctctccccttctcatgatacttccctcgattcttactacgccgcc
gtccaaaaaatcatctccgcttccaacaacggagacgccaggttgatggaggaagccgcg
gctgagatcgagaccgctgctaatgcggacggtgatccgcacgctcgttcggtgttaggt
tttttgtacgggatggggatgatgcgtgagagaaacaaagctaaagcatttttgaatcat
tatttcgctgccgaaggtggtaatgcccagtccaagatggctttggcttacacttactcg
cgtcaagatatgcatgaaaaagctgttaaattatatgctgaactggcagaaacagcggta
aacagtttcttgatatccaaagattcgccggtaatagaaccgattaggatacacaatgga
gctgaggagaacaaggaagctttgaagaaatcaagaggtgaagacgatgaagattttcag
atattggaatatcaagcacagaaagggaatgccggtgctatgtacaaaatgggtcttttt
tactatttcggattgagagggttgcgccgtgatcattccaaggctttgatgtggtttttg
aaagctgtggataaaggggagcctaggtctcttgaacttcttggtgagatttatgctaga
ggggctggaattgaaaggaattataccaaggctcttgagtggctttcacttgcatccgaa
catgggctttattcagcttacaatgggatgggctatttacatgttaaaggctatggtgtg
gagaagaactataccaaagcaaaagaatacttcgacaaggctgctgataatgaagatgct
ggtgggcactataatttaggagtaatgtaccttaaagggatcggagtgaagagggatgtg
aagattgcttgtaagtgttttattgtggcagccaatgcaggtcaaccaaaggcgttttat
cagttggctaagatgtttcatactggtgttgggcttaaaaagaatcttcctatggctact
gcattatacaagctagttgccgaacggggaccatggagttccctctctagatgggcactt
gaatcatacctaaaaggtgacatgggcaaagcattcctcttgtattctaggatggctgag
ctaggttacgagatagcacagagtaatgctgcatggatccttgacaagtatggtgagcgc
agcatgtgcatgggtgaatcgggggcttgcacagatgcagaaaggcatcaacgtgctcat
tctttgtggtggcaagcttccgagcagggtaacgaacatgcggcattacttattggggat
gcatattactatggcagaggaactgtgagggattatgagcgtgcagctgaagcttacaaa
catgcaaaatcccaatcgaatgctcaagctatgttcaacctgggatacatgcatgagcat
ggccaaggacttccttttgacctccatcttgctaagcggtactatgatcaggcattagag
ctagatcctgcagcaaagttgcctgtcacactggcactagcaagtttgtgggtacgaaag
aactatgctgacagtttcctggtccacataattgattccctgcctgaagtttatcctaga
gttgaagaatgggtggagaatgtgatcatggaggaaggaaatgcaacaatattgacacta
tttgtctgtctactcactgttctatatctgcgtgagcgacaacgcaggcatgctattgct
gctgcgggggcacacgaacctaatgagcatgttgtacctgctgcacgctaa

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