Gossypium hirsutum (upland cotton): 107929100
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Entry
107929100 CDS
T04793
Name
(RefSeq) cryptochrome-1 isoform X1
KO
K12119
cryptochrome 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107929100
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Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-GeneID:
107929100
NCBI-ProteinID:
XP_016715920
UniProt:
A0A1U8LN14
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Position
A09:83671228..83674446
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AA seq
658 aa
AA seq
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MNSNTSVPSVSPENMSSSSKTIVWFRRDLRIDDNPALAAAARDGSVFPVYIWCPKEEEQF
YPGRVSRWWLKQSLAHLEQSLKFLGSELVLIKTHSTLSALLDCIKATGATKLVFNHLYDP
VSLVRDHNIKEKLAEAGISVQSYNGDLLYEPWEIYDEKGQAFTTFDAYWDKCLNMQMEPI
SLLPPWRLVPVAVTGTLERCSIEDLGLENETEKASNALLGRAWSPGWGSADKAITEFVEH
NLCDYSRSRLKVGGNSTSLLSPYLHFGELSVRKVFQSARMKQILWRREQNSQGEESVTLF
LKAVGLREYSRYLTFNFPFTHERPLLSNLKYFPWNADVNRFKAWRQGRTGYPLVDAGMRE
LWATGWIHNRIRVIVSSFAVKFLLLPWRWGMKYFWDTLLDADLECDILGWQYISGSLPDG
HELERLDSPQIQGSKFDPEGEYVRQWLPELARMPTEWIHHPWDAPHTVLKAAGVELGLNY
PKPIIDIDIAREHLREAIFKMWEMEAAAKAATSDGMNEEVFDNSVGIETSAIPKVILKEN
SSCPTYSSNDQRVPSFQNGNNGSLHRKRAKCVEEERLPADKPNNHNKEAGTSRGEEDLCS
TAESSASKRQTISRMSFSVPQSCSSSDGRPMLECESSDMKRSWQEKIDLEQTSSKNGN
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaattcgaacacttcggtcccttcggtctcaccggaaaacatgagtagtagcagtaag
acaatagtttggttcaggagagatcttagaattgatgacaatcctgctttagccgccgcc
gctagggatggcagcgttttcccggtttatatatggtgtcctaaagaggaagaacagttc
tatccaggtcgagtatcgcgatggtggttgaagcaatctcttgctcatttggaacagtct
ttgaagtttcttggttctgaacttgtgctgattaagacccatagtactctttcagctctt
ttagattgcatcaaggctaccggagcgactaaactcgtgtttaaccatctttatgatccg
gtttcgcttgttcgagatcataacatcaaagagaaacttgcagaggccgggatttccgtg
caaagctataatggagatttgttatatgaaccatgggagatatatgatgagaaagggcaa
gcttttacgaccttcgatgcatattgggataagtgtttgaacatgcaaatggaacccatt
tcacttcttcccccatggagattggtccccgttgcagtgacaggaacattagaaaggtgc
tctattgaagatttgggcctcgaaaacgaaacagaaaaagctagcaatgcattgttagga
agagcgtggtctccaggttggggcagcgccgataaggctataacggagtttgttgaacat
aatctatgcgactattcaagaagtaggcttaaggttgggggcaactccacatcacttttg
tctccgtatcttcatttcggggagctaagtgtgaggaaagttttccagagtgcaaggatg
aaacagatactatggcgaagagaacagaattctcaaggggaagagagtgtgacacttttt
ctgaaggctgttgggcttagagaatattcccggtaccttactttcaactttccgttcact
catgagagaccgttgttgagcaacttgaagtatttcccttggaatgctgatgtgaaccgg
tttaaggcttggagacaaggtcggaccggatatccgttggtggatgctggaatgagggag
ctttgggcaactggttggatacacaacagaatacgagtgattgtttcgagtttcgcggtg
aagtttcttcttcttccatggagatggggaatgaagtacttctgggacacacttttggat
gcagatttagaatgcgatattcttggttggcagtacatctctgggagcttaccggatggt
cacgagctagaacgattagacagtccacagattcaaggctccaaatttgaccctgaaggt
gaatatgtaaggcaatggctgccggagctagcgaggatgccgactgagtggatccatcat
ccttgggatgcacctcataccgtgcttaaagctgcaggtgtggagttggggttgaactat
ccgaaacccataatagatatcgatatagctagagaacatctgagagaagctatatttaaa
atgtgggaaatggaagcagctgcaaaggctgcaacttcagatgggatgaatgaagaggtt
ttcgacaattctgttggtattgaaacctccgcgatcccaaaagttatcctaaaggagaac
tcttcttgtccaacatattcatctaatgatcaaagggttccatcatttcaaaatggcaat
aatggttcattgcataggaagagagcaaaatgtgtggaagaagaaaggttgcctgctgat
aaaccgaataatcacaacaaagaagcagggacttcgagaggagaagaagacttatgctcg
acagctgagtcttcagcatcgaagaggcaaactattagcagaatgtcattctctgttccc
cagtcttgttcttcgtccgatggcaggcctatgctggagtgtgaatcgtctgatatgaag
cggtcatggcaagaaaagatcgatttggaacagacatcaagcaagaatggtaattaa
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