Gossypium hirsutum (upland cotton): 107934982
Help
Entry
107934982 CDS
T04793
Name
(RefSeq) syntaxin-31
KO
K08490
syntaxin 5
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107934982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107934982
Membrane trafficking [BR:
ghi04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
107934982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin
Syntaxin-5_N
Syntaxin_2
ISG65-75
Motif
Other DBs
NCBI-GeneID:
107934982
NCBI-ProteinID:
XP_016722997
UniProt:
A0A1U8M855
LinkDB
All DBs
Position
D10:complement(65035096..65037609)
Genome browser
AA seq
401 aa
AA seq
DB search
MATPHWTTLTTEETSRMNFVLIFSQVTVSLQFLNINRFTGSRQPNLPFSGRLKRRRFPPP
MGSPYRDRTAEFRSLSQTLQKLGGGISTVNHNINHLQDDHVSKPLPSPSSRSEFNKKASL
IGSGIHETSQKIGRLAKLAKRSSMFDDPLVEIQELTALIKTDITTLNMALSDLQTLQNME
IADGNYSEDRIVHSTTVCDDLKNKLMGATKHFQEVLTARTENIKAHENRKQLFSKSTIRE
NPFQHQTRSVAEPPPWSSSSKVPTSSPLLGPPPNGVQAGSQLRRRPAVDGTPSNHMEMPM
LQQVVPRQEEYSQGRAVALQNVESTISELSGIFTHLATMVAHQGELAIRIDEDMDQSLAN
VEGARSALLRHLNQISSNRWLLIKIFAAIIFFLVIFIIFVA
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggcaacacctcattggaccacgctaacaacagaagaaacctcccgaatgaattttgtt
ctgattttttctcaggtaaccgtttctctccaattccttaatataaatcgtttcaccggc
agccgccaaccaaatctccctttctccggccgacttaaacggcgccgtttccctccgccc
atggggtccccgtacagagatcggaccgccgagttccgatcactatcccaaacgcttcaa
aagctcggcggagggatctcaaccgtcaatcataatattaatcatctccaagacgaccac
gtttctaaaccactgccgtctccatcctccagatctgagttcaataaaaaggcttcttta
atcgggtcgggtatccatgaaacctctcaaaagattggtcgacttgctaaattggcgaaa
aggtcatcaatgttcgatgatccgcttgttgaaatacaagaactgactgctttgataaaa
actgatattaccaccttaaatatggcactttctgatttacaaacacttcaaaacatggag
attgccgatgggaattactccgaggatcgaattgttcattcgacgactgtttgtgatgac
ttgaagaacaagttaatgggtgctacaaagcattttcaagaagtgttgactgcaagaact
gagaatattaaagctcatgaaaataggaaacagttattctccaaaagtacaataagagag
aacccgtttcaacatcaaacgagatccgtagctgagccacctccttggtctagttcttca
aaggtccccacgagttcaccactgttaggaccgccaccaaatggagttcaagctggaagc
caactgagacgaaggccagctgtggatggcacgccttcaaaccacatggaaatgcctatg
ttgcaacaggtagttcccaggcaagaggaatactctcaaggtagagcagttgcacttcaa
aatgtcgaatctacaatttcagaacttagtgggatctttacacatctagctacaatggtt
gcacatcaaggagaactagctatcaggattgatgaagatatggatcaatcattagctaat
gtcgaaggtgctcgtagtgctctattgaggcatcttaaccaaatatcatcaaatagatgg
cttttaatcaagatatttgctgcaatcatcttttttctagtgatcttcatcatctttgta
gcttga
DBGET
integrated database retrieval system