Gossypium hirsutum (upland cotton): 107935128
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Entry
107935128 CDS
T04793
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog
KO
K14016
ubiquitin fusion degradation protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107935128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
107935128
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
107935128
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GFIT
Motif
Pfam:
UFD1_N2
UFD1_N1
CDC48_2
Motif
Other DBs
NCBI-GeneID:
107935128
NCBI-ProteinID:
XP_016723172
UniProt:
A0A1U8M8M6
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Position
A09:84707822..84708868
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AA seq
348 aa
AA seq
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MEISHDQDHVDEISQSHFEESMDDFLKEIDDNDENYECLLEENDDDDGDIDDENYIDDRQ
SQIDTWNFYDYPLFEQDYRCLPLSFHDKINDDLSVGNRIIMPSMDLEFIIENQVPLPLQF
EIHNLSEGKFSHCGVLEFSGHEDGVVFLPDWMMENLQLKACDFVYMKNKKLEQGSYIKIQ
PHTSDFISIPNPKAVLEENLRKFCCLTKGDTIIISHGSKRFYIDIVETKPDDAISIVDID
CNVDFAPALDYEEHAIPVSINFGLKKKEEKEEQTQKSEFKPFTGLARKLNAEPCCSTYVP
KIGRNREVDEANSKRSSICKSEVTSQNKETDDKPKFQAFSGRSYTLER
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaatatctcatgatcaagatcacgttgatgaaatctctcaatctcattttgaagaa
tctatggatgattttttaaaagaaatcgatgacaacgacgaaaattatgagtgtctttta
gaagaaaacgacgacgatgatggtgatattgatgacgaaaattacattgatgatcgtcaa
tctcaaatagatacttggaatttttatgattaccctttgttcgaacaagattatcgttgc
ctcccattatctttccacgacaaaataaatgatgatttatcagttggtaatagaatcatt
atgccctccatggatcttgaatttatcatagaaaatcaagtccccttgcctttacaattc
gagattcataacttatcggaagggaagttttcccattgtggggttctcgagttcagtgga
catgaagacggtgtagtgttcttaccagattggatgatggaaaacttgcaactaaaagca
tgtgatttcgtctatatgaagaataaaaagctagaacagggaagttacatcaagattcaa
ccacacacaagtgattttatttctattccgaatccgaaagctgtgttggaagaaaattta
cgtaaattttgttgcttaacaaagggtgataccataatcatcagccatgggagcaaaagg
ttttatattgacatagtggaaactaagcccgacgatgctattagcattgtggatatagac
tgcaacgttgatttcgctcctgctttggattacgaagagcatgcaattcccgtttcaatt
aattttggtttaaagaagaaagaagaaaaggaggaacaaactcagaaatccgagttcaaa
cctttcacgggtttagctagaaaattgaatgcagaaccatgttgcagtacttatgtacct
aaaatcggcagaaatagggaggtggatgaagcaaattcaaagagaagttcaatctgcaaa
tcagaggttacgagtcagaataaagaaactgatgataagccaaagtttcaagctttttca
gggaggagctacacattagagaggtga
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