Gossypium hirsutum (upland cotton): 107940215
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Entry
107940215 CDS
T04793
Name
(RefSeq) tryptophan synthase alpha chain isoform X1
KO
K01695
tryptophan synthase alpha chain [EC:
4.2.1.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00260
Glycine, serine and threonine metabolism
ghi00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ghi01100
Metabolic pathways
ghi01110
Biosynthesis of secondary metabolites
ghi01230
Biosynthesis of amino acids
Module
ghi_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
107940215
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
107940215
Enzymes [BR:
ghi01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
107940215
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Trp_syntA
PcrB
His_biosynth
ThiG
Ribul_P_3_epim
TMP-TENI
BtpA
NanE
IGPS
FMN_dh
TIM
Motif
Other DBs
NCBI-GeneID:
107940215
NCBI-ProteinID:
XP_016729141
UniProt:
A0A1U8MQK0
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Position
D08:complement(61946435..61950877)
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AA seq
314 aa
AA seq
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MGISLKSTAAGLFLLKNHNTHSPSRFPSFKPLVSTKRFTPMASVATSQTLGISETFSKLK
NQGKVAFIPYITAGDPDLSTTAEALKVLDSCGSDIIELGVPYSDPLADGPVIQAAATRSL
ARGTNLNAILSMLKEVAPQLSCPIALFAYYNPILKRGVEKFMSAIRDVGIQGLVVPDVPL
EETELLRREALKNKIELVMLTTPTTPTDRMKAIVEAAEGFVYLVSSVGVTGARASVSDRV
QTLLTEIKEQVTTKPIVVGFGISKPEHVKQVARWGADGVIVGSAIVKVLGEAKSPEEGLK
ALETFTKSLKSVLP
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgggtatttctttgaaatctacagcagcgggattgttcctgttaaagaaccacaatacc
cattctccatctcgctttccttcattcaaacccttagtttcaactaagagattcactcca
atggcttctgttgctacttctcaaactcttggcatttctgaaaccttctctaaactgaaa
aatcaaggcaaagttgcattcatcccctacatcacagctggtgatcccgacctttcaaca
acagcagaggctcttaaggtgcttgattcatgtggctcggacataattgaactcggtgta
ccatattctgatcctctggctgacggtcccgtaatccaggctgcggctacgcgttctttg
gcaagaggaaccaacttgaatgcaattctttcgatgttgaaggaggtggctccacagtta
tcttgcccgattgctttatttgcatattacaacccaattctaaagcgtggggttgagaaa
tttatgtccgctataagggacgtaggcatacaaggactggtggttccagatgtccctcta
gaagagaccgaacttttgagaagagaagctctcaaaaataagattgaactggtaatgctt
acaacaccaactacgccgacagaccgaatgaaagcgattgtggaagcagcggaaggattt
gtgtacctcgtgagctcagtcggagttaccggtgcccgtgcatctgttagcgatcgggtt
cagactcttttaactgaaattaaagagcaggtaacaaccaagcctattgtggttggcttt
ggcatatcgaaacccgagcatgtgaagcaggttgccagatggggggccgacggtgtgatc
gtcgggagtgcgattgtgaaggtgctgggtgaagctaagtctcctgaggaaggattgaag
gcgttagaaacttttaccaaatccttgaaatctgtacttccttga
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