Gossypium hirsutum (upland cotton): 107940344
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Entry
107940344 CDS
T04793
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00531
Glycosaminoglycan degradation
ghi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
107940344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ghi00536
]
107940344
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
107940344
Glycosaminoglycan binding proteins [BR:
ghi00536
]
Heparan sulfate / Heparin
Enzymes
107940344
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
107940344
NCBI-ProteinID:
XP_016729265
UniProt:
A0A1U8MR23
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Position
D10:64916074..64918475
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AA seq
521 aa
AA seq
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MMNFKSITFFVVFLSCLLVSKAEKVEVVVEGATSIAQTDEDFICVTLDWWPTNKCDYDQC
PWGQAGLFNLDLKNKILEKAVKAFHPLRIRVGGSLQDQVVYNVRNNIENCQPFQKQDKGF
LFGFSIGCLDMKRWDELNEFFNQTRAKVTFGLNALIGRKESKTEKTLWVGDWYSHNARDL
MSYTISKGYTIDSYELGNELCGVGVSARIEAKQYAKDMATLKNLVKEMYPNPKTQPKILG
PGGFYDKKWFDTFLDASGHDVIDGVTHHIYNLGPGNNPDVVRRVQDPFFLTQIAQTFKDV
SNAIVKFAPWSGAWVSESGGAYNSGGQLVSYTFAFGFWYLDQLGMTSVYNHKVYCRQALT
GGNYALLNTTTFVPNPDYYGALLWHRVMGSKVLSVTHKGSPYLRVYSHCAKKEPGVSFVF
INLSKNTSFEIDLFHDLNLNGGSPNFEFKGHKKREEYHLTPKDGNILSSIVLLNGTPLEL
SDSLEIPELKPKLVDGLKPISISAHSIAFVIIRDFNAPACS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatttcaaaagtattacgttttttgttgtgtttttgtcctgtcttttggtctca
aaggcagaaaaggttgaagttgtggttgaaggagcaacttccatagctcaaaccgatgaa
gattttatttgtgttacccttgattggtggcctacaaacaagtgtgattatgatcaatgt
ccgtggggtcaagctggactttttaatttggatttgaagaacaagattcttgaaaaggct
gtaaaagcatttcatcctttgagaattagagttggaggttcgttacaagatcaagtggtg
tacaacgttcgaaataatattgagaattgccaaccattccaaaaacaagacaagggcttc
ttattcggtttctccattggatgtcttgacatgaagagatgggatgaactcaatgagttt
ttcaatcaaactcgagctaaagttacatttggtttaaatgctcttatcggaagaaaagag
tccaaaactgaaaagactctttgggttggtgattggtattcacataatgctcgggatctc
atgagttatacaatttccaaaggatatacaattgactcttatgaattaggaaatgaattg
tgtggagtaggagttagtgctaggattgaagctaaacaatatgcaaaagatatggcaaca
cttaaaaatcttgtaaaagagatgtatccaaatccaaaaacacaacctaagattttaggc
ccgggaggtttctatgacaagaaatggttcgatacttttttggatgcttcaggacatgac
gttattgatggagttacacatcatatttataatctcggacccggtaataacccagatgtg
gttcgtcgtgtccaagatccatttttcttgacccaaattgctcagacatttaaagatgtt
tcaaatgctattgtcaaatttgcaccatggtctggtgcatgggttagtgaatcgggtgga
gcttataacagtggtggccaattagtgtcgtatacatttgcatttggcttttggtacttg
gaccaattgggaatgacatcagtttataaccacaaagtttattgcagacaagctttgacc
gggggcaattatgctcttcttaacactaccacatttgttcccaatccagattattatggt
gcacttttgtggcatagagttatggggagtaaagttctttccgtcacgcataagggttct
ccatatttacgtgtatactctcattgtgccaaaaaggagcccggggtttcttttgttttc
atcaacttatcgaagaatacctcatttgaaattgatcttttccatgatctaaatttaaat
ggtgggagtccaaattttgaatttaaaggacataaaaagcgagaagagtatcatttgact
ccaaaagatgggaacatcttaagcagtattgtattgctaaacggaacaccattggaactt
tcagactcgttggagataccagagttgaagccgaagcttgtggatggtttgaaacccatt
agcatctctgctcattcaatcgcatttgtaatcataagagattttaatgcacctgcatgt
tcataa
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