Gossypium hirsutum (upland cotton): 107942025
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Entry
107942025 CDS
T04793
Name
(RefSeq) ABC transporter B family member 2-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107942025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107942025
04147 Exosome [BR:
ghi04147
]
107942025
04090 CD molecules [BR:
ghi04090
]
107942025
Enzymes [BR:
ghi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
107942025
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
107942025
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107942025
CD molecules [BR:
ghi04090
]
Proteins
107942025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_22
AAA_16
Zeta_toxin
AAA_21
RsgA_GTPase
AAA_15
DUF87
nSTAND1
AAA_30
AAA_19
APS_kinase
DUF815
Motif
Other DBs
NCBI-GeneID:
107942025
NCBI-ProteinID:
NP_001314387
UniProt:
Q9SDM5
LinkDB
All DBs
Position
A03:345294..353537
Genome browser
AA seq
1249 aa
AA seq
DB search
MTPSAGSFSGDRDDDGDATKKKKKQRKVPLLKLFSFADFYDHVLMGLGSLGACVHGASVP
VFFIFFGKLINIIGMAYLFPKEASHKVAKYSLDFVYLSVAILFSSWIEVACWMHTGERQA
AKMRMAYLKSMLNQDISLFDTEASTGEVISAITSDIIVVQDALSEKVGNFMHYISRFIAG
FSIGFARVWQISLVTLSIVPLIALAGGIYAYVATGLIARVRNSYVKAGEIAEEVIGNVRT
VQAFAGEERAVKSYKDALMNTYTYGKKAGLTKGLGLGSLHCVLFVSWALLVWFTSIVVHK
NIANGGDSFTTMLNVVISGLSLGQAAPDISAFIRARAAAYPIFEMIERNTVSKTSSKTGR
KLSKVEGNIELKNVSFSYPSRPDVVIFDRFCLNIPTGKIVALVGGSGSGKSTVISLIERF
YEPLAGEILLDGNNIKGLDLKWLRQQIGLVNQEPALFATTIRENILYGKDDATVDEITRA
AKLSEAIAFINNLPDRFETQVGERGIQLSGGQKQRIAISRAIVKNPPILLLDEATSALDA
ESEKSVQEALDRVMVGRTTVVVAHRLSTIRNADVIAVVQNGKIVETGTHDELISNPNSTY
SSLVQHQETSPLQRYPSQGPTLSRPLSVSYSRELSRTRTSFGASFRSERDSVSRAGADGI
DAGKQPYVSPGRLYSMIGPDWYYGFFGTVTALIAGAQMPLFALGVSQALVAYYMDWETTC
HEVKKIAILFCCASVITVIVHAIEHLCFGIMGERLTLRVREGMFSAILKNEIGWFDDLNN
ASSMLASRLETDATFLRGVVVDRTSILIQNVGLVIAAFIIAFILNWRITLIILATFPLII
SGHISEKLFMQGYGGNLSKAYLKANMIAGEAVSNMRTVAAFCAEEKILDLYARELIEPSE
RSFKRGQIAGIFYGISQFFIFSSYGLALWYGSVLMGKELASFKSVMKSFMVLIVTALAMG
ETLALVPDLLKGNQMVASVFEIMDRKTQVVGDAGEELTNVEGTIELKGVHFSYPSRPDVV
IFKDFDLKVRSGKSMALVGQSGSGKSSVLALILRFYDPTSGKVMIDGRDVKKLKLKSLRK
HIGLVQQEPALFATSIYENILYGKEGASESEVVEAAKLANAHSFISSLPEGYSTKVGERG
VQLSGGQKQRVAIARAVLKNPEILLLDEATSALDVESERVVQQALDRLMRNRTTVMVAHR
LSTIKNADRISVIQGGRIIEQGTHSSLIENRNGPYFKLINLQQQQQMEQ
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgacaccttcggccggttcattttccggcgaccgagatgatgacggcgatgccacgaag
aagaagaagaagcaacggaaagttccattgttgaagctgttttcatttgctgatttttat
gaccatgtgttaatgggattgggatcactaggtgcatgtgtgcatggtgcttcggtgcct
gttttcttcattttctttggcaaattgattaacattataggaatggcttatcttttccct
aaagaagcttctcataaagttgcaaagtattcgttggattttgtatatctcagtgtcgct
attttattttcatcatggatagaggtggcttgttggatgcataccggagaaagacaagcg
gcaaaaatgaggatggcatatctaaaatcaatgctaaatcaagatataagtttatttgac
acagaagcttcaactggagaggtcatttctgcaattacaagtgacattattgttgttcaa
gatgccctttctgagaaggttgggaatttcatgcattatataagcagattcatagcaggt
ttcagcattggctttgctagagtatggcaaatcagccttgtaactctctccatagtccca
ttgatagcccttgctggtggcatttatgcttatgttgccactggtctcattgctcgagtt
cgaaactcatatgtcaaagctggtgaaattgcagaagaggtgattgggaatgtaagaaca
gtacaagcatttgcaggggaagaaagggctgtgaaatcatacaaggatgctttgatgaac
acatacacatatggtaaaaaagctgggttaacaaagggtcttggccttggttcactgcat
tgtgtgcttttcgtttcgtgggcattgcttgtttggttcacaagtattgttgttcataaa
aacatcgcaaatggtggggattctttcactacaatgcttaatgttgtcatttctggcctg
tcgttaggacaagcggcaccagacatatctgcgtttattcgagcaagggcagctgcgtat
cctatattcgagatgatagagaggaacacagttagtaaaaccagctcgaaaacgggccgt
aaactaagcaaagtggaggggaacattgagctcaagaatgtatctttcagttatccgtct
cgccccgatgtggtcatcttcgataggttctgccttaacatacctactggaaagattgta
gctcttgtcggagggagtggctcggggaaaagtacggtcatatcattaatcgaaaggttt
tacgagccacttgcaggagaaatattgttggatgggaataatatcaagggccttgacctc
aaatggcttagacaacaaattggtttggttaatcaagagcctgctctttttgctactacc
attagggagaacattctatacggaaaagacgatgctacagtcgatgaaataacgcgtgcc
gcaaaactttctgaggccattgcctttattaacaatctccctgatagatttgagactcag
gttggtgaaagaggaatacaactatcaggtggacagaagcaaaggattgcgatatctcgg
gcaatagtgaaaaatccacctattcttttactcgatgaagcaacgagtgcccttgatgca
gaatccgaaaagagtgtgcaagaggcacttgatcgtgtgatggtggggcgaacgacggtg
gtggtagctcacaggctttctactattaggaatgcagatgtgattgctgttgttcaaaat
gggaagattgttgaaaccggtactcatgatgagcttatttcgaacccgaacagtacttac
tcttcgctcgttcagcatcaagagacatcgcctttgcaacgctacccttcacaaggtcct
actttaagtaggccactcagtgtgagttattcacgagaattatcccgaacaaggacgagc
tttggtgcaagttttcgttctgaaagagactcagttagccgtgctggtgctgatggaatc
gatgcagggaaacaaccttatgtttcacctggaagactgtattctatgataggacctgac
tggtattatgggttctttggtaccgttaccgcattgattgccggagctcaaatgcctcta
tttgctctcggggtttctcaagctctcgtagcctattacatggactgggaaacaacgtgc
cacgaagtcaagaagatcgccatcctgttttgttgtgcttctgtcataacggtcatcgtt
catgcaatagagcacctatgttttggcatcatgggagaacgactcactcttcgtgtgcgt
gaagggatgttttcagccatcttgaaaaacgagattggatggttcgatgacttaaacaac
gcaagttccatgcttgcatctcgtctcgaaaccgacgccacgtttctaagaggtgtagtc
gtggaccggacatcgattctcatacaaaacgtaggcttggtcattgctgccttcatcatt
gcattcatcttaaactggagaatcacacttattatcttggccacttttccattgatcata
agtggtcacattagcgagaaactattcatgcaaggctacggcggtaacttgagcaaagca
tatctaaaagcaaacatgatcgccggcgaggctgtcagtaatatgcgaactgtcgctgca
ttttgcgctgaggaaaagatccttgatctttatgcccgtgagctcatagagccttcggaa
cgttcatttaagcgtggtcaaattgcagggatattctatgggatttcccagttcttcatc
ttctcatcttatggccttgccttatggtatggttctgttttaatggggaaggagctagct
agctttaaatcggtcatgaaatcgttcatggtgttgattgtgacggcattagccatggga
gaaacgttggcactggtcccggaccttctaaaagggaaccaaatggtggcatcggtgttc
gagattatggaccggaagacgcaggttgttggggatgctggcgaagagctaacaaatgtg
gaaggtaccattgagctaaagggtgttcactttagttatccgtcgagaccggatgtggtg
atattcaaggattttgatctgaaagttcgttcagggaagagtatggcgcttgtgggacaa
agcggatccggtaagagctcagttcttgctcttatacttcggttctacgatccaacatct
gggaaagtgatgattgatggcagagacgttaagaaactaaagctcaaatcccttcggaaa
catatcggattagtccaacaagaaccagctcttttcgccacttcaatatacgaaaacatc
ctatacggcaaagaaggagcatctgaatctgaagtggtcgaagcggctaaactcgccaat
gcacatagtttcataagttccctccccgaaggttactcaacaaaagtcggcgagcgaggg
gtacaactctcgggtggccagaaacaaagagtagccattgctcgagctgtcctcaagaac
cccgaaatcttgctgctcgacgaagccactagtgctctcgacgtcgagtcggagcgcgtg
gtgcagcaagctctcgaccggttaatgaggaaccgaacaacggtaatggtggctcatagg
ctgtcgacaattaaaaatgcggatcgaatatcggtcattcagggtggacgaataattgag
caagggacacattcgagcttaatcgaaaatcggaatggaccgtactttaagttaatcaac
cttcagcagcagcagcaaatggaacaatag
DBGET
integrated database retrieval system
