Gossypium hirsutum (upland cotton): 107942308
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Entry
107942308 CDS
T04793
Name
(RefSeq) transcription factor SPEECHLESS-like
KO
K20558
transcription factor SPEECHLESS
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
107942308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107942308
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
107942308
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GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Nro1
Motif
Other DBs
NCBI-GeneID:
107942308
NCBI-ProteinID:
XP_016731443
UniProt:
A0A1U8N103
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Position
A12:complement(106963256..106965443)
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AA seq
329 aa
AA seq
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MDDNLCEFADEPEFVGEDDLFSIFESLDGLIDFPVPFTPLEEMTTATTAAAVGVGGGSTQ
KSTPLMESETEETSPKTKRQKLGSLEETMNTDGPQRMSHITVERNRRKQMNEHLSVLRSL
MPCFYVKRGDQASIIGGVVDYINELQQVLQALEAKKQRKVYSEVLSPRVVLSPRPSPLSP
RKPPLSPRLNLPISPRTPQPGSPYKPRLQKGYLSPTMAASTSLEPSPTSSTSSVDNNNEL
VANSKSPVADVEVKFSGPNLVLKTVSPRIPGQALKIISALEELSLEILNVNINTVDETML
NSFTIKIGIECQLSAEELAQQIQQTFGHC
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atggatgataatttgtgtgagtttgccgatgagcctgagttcgtcggtgaagatgatttg
tttagtatttttgaaagtttagatggtcttattgatttcccagtaccttttactccgtta
gaagaaatgacgacggctacaacggcggcggctgtgggtgttggtggtggtagtacacaa
aaatcaactccattaatggagtcggaaacggaggaaacttcaccgaaaaccaagagacaa
aaactgggttctttagaagaaacgatgaatactgatgggcctcaaaggatgtctcatatt
accgtcgaacggaaccggaggaagcaaatgaacgaacatttatcggtgctgagatctttg
atgccgtgtttttatgtcaaaagaggtgatcaagcatccatcattggtggtgtagtggat
tatatcaacgagttacagcaagttttacaagcactcgaagctaaaaaacaaaggaaagtt
tacagtgaagtgttgagtccaagggtggttttaagtccaagaccgtcaccgctcagtcct
cggaaaccaccgttgagtcctcgtttgaacttgccgataagtccgagaacaccacaaccc
ggtagtccgtacaaaccacggttgcaaaagggttacctctcaccaacaatggcggctagt
acttcacttgaaccctctcccacttcttcaacttcctccgttgacaacaacaacgaactc
gtcgctaactcaaaatcaccggtagccgacgtggaagtgaagttttcgggtcccaacctt
gttttaaagacagtatctcctcggattcccggtcaagctctcaaaataatctcagctctt
gaagaactctcactggaaatccttaatgtcaacattaacaccgttgatgaaaccatgctt
aactctttcacgatcaagattggaattgaatgccaactgagtgctgaagaattggctcaa
caaatccagcaaacattcggccattgttag
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