Gossypium hirsutum (upland cotton): 107946295
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Entry
107946295 CDS
T04793
Name
(RefSeq) adagio protein 3-like
KO
K12116
flavin-binding kelch repeat F-box protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
107946295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107946295
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
107946295
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Kelch_4
Kelch_3
Beta-prop_ATRN-LZTR1
Kelch_2
Kelch_5
PAS_9
Kelch_1
Kelch_6
PAS
PAS_3
NANM
F-box-like
F-box
PAS_4
Motif
Other DBs
NCBI-GeneID:
107946295
NCBI-ProteinID:
XP_016736042
UniProt:
A0A1U8NAE9
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Position
D12:complement(48878100..48881081)
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AA seq
627 aa
AA seq
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MSKGEEVTPSSGKRQRFSKDEDHKLERREEEGDDEDEGKSELPLKPGLLYYPTIPTSFVV
SDALEPDFPVIYVNKVFEVFTGYRADEVLGRNCRFLQYRDRRAQRRHPLVDPFVVSEIRR
CLEEGIEFEGELLNFRKDGTPLVNRLKLAPIRDDDGIVTHVIGIQVYSEAKLDLNQVSYP
VFKETCKQQLDQSSKCSYLSGNPLFNHHQEICGILQLSDEVLAYNILSRLTPRDVASIGS
VCRRIRQLTKNEHVRKMVCQNAWGKEVTGTLDMMTRKLGWGRLARELTTLEAVCWRKLTV
GGAVEPSRCNFSACAAGNRLVLFGGEGVDMQPMNDTFVLNLEAANPEWQLVSVESSPPGR
WGHTLSCLNGSWLVVFGGCGRQGLLNDVFVLDLDAKQPSWREVSGGTPPLPRSWHSSCTV
DGSKLVVSGGCTDAGVLLSDTYLLDLTSEKPTWKEIPSSWTPPSRLGHSLSVYSRTKILM
FGGLAKSGNLQLRSGEAYTIDLEDEEPQWRQLDCSAFTSIGNQNAIIPPPRLDHVAVSMP
CGRIIIFGGSVAGLHSPSQLFLLDPSEEKPPWRTLNVPGQPPKFAWGHGTCVVGGTRVMI
LGGQTGEELLLNELHELRLASRQDLDS
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaggagaagaagtgacgccaagcagtggaaaacggcagcgtttctcgaaagat
gaagaccacaagcttgaacgaagggaggaagaaggcgacgatgaagatgaaggaaagagc
gagcttcctttgaagccagggctgttgtattacccgacaattccgacttctttcgttgtt
tccgatgctcttgaacctgattttcccgtcatttatgtcaacaaagtcttcgaggttttc
accggttaccgagcggacgaagtccttggtcgcaactgtcgtttcttacagtatagagac
agacgtgctcaaagacggcaccctttggttgatccttttgttgtttccgagataagaaga
tgtcttgaggaaggaattgaatttgaaggggagcttctgaatttcaggaaggatggcact
ccattggtgaacaggttaaaacttgcacctatacgtgatgatgatggaattgttacacat
gttatcggtattcaagtttattccgaagcaaaactggatctgaaccaagtttcatatccg
gttttcaaagagacttgtaagcagcagttggatcagtcatctaaatgctcttatttgagt
ggaaatccactgtttaatcatcatcaagaaatatgtgggatactccaactctctgatgaa
gtcttggcttataacattttatcacgattgacaccaagggatgttgcttctattggatct
gtgtgcagaaggatacgtcaactaactaaaaatgagcatgtgaggaagatggtatgtcag
aatgcctggggaaaggaagtcactggtacactggatatgatgactaggaagttggggtgg
ggacgtcttgcccgagaactgaccactctcgaggctgtttgttggaggaaactgactgtt
ggaggagcagtagagccttctcgttgcaacttcagtgcttgtgccgcagggaaccgtctt
gtgctttttggaggggagggagtcgacatgcagccaatgaacgacacatttgttctcaat
cttgaagctgcaaatccggagtggcaactggtgagtgtggaatcatctcctcctgggcgc
tggggccacactctctcgtgcctgaatggttcatggttggtggtattcggaggatgtgga
aggcaagggttgctcaatgatgtttttgttcttgacttggatgccaagcaaccttcatgg
agagaagtatctggtggaaccccccctctccccagatcttggcatagctcgtgtacggtc
gatggttctaagttggttgtttctggtgggtgtacggatgctggagtgcttctaagtgac
acataccttctggatctcacttctgaaaaaccaacatggaaagagattccatcgtcatgg
acacctccttctaggttaggccattcactttcggtttacagtcgaactaaaattcttatg
ttcggagggttggcaaagagtgggaacttgcaactgcgatcaggtgaggcctacactatt
gatttggaggatgaagaaccacagtggaggcaactagactgtagtgccttcaccagcatc
ggtaaccaaaatgccatcatacctcctcctcgacttgatcacgttgcagtaagcatgcct
tgtgggaggataattatatttggtggttcagtcgctgggttgcactctccttctcagctc
ttccttcttgatccttcagaggagaaaccaccatggaggacactgaatgttcctgggcaa
ccaccgaaatttgcttggggtcatggtacgtgtgtggttggagggactagggtcatgata
ttaggcggacagacgggggaggaattgctactcaacgaactgcacgagttgcgcttagca
agcaggcaggacttggattcatga
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