Gossypium hirsutum (upland cotton): 107946325
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Entry
107946325 CDS
T04793
Name
(RefSeq) tricalbin-3-like
KO
K28063
extended synaptotagmin
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107946325
Membrane trafficking [BR:
ghi04131
]
Exocytosis
Calcium ion-dependent exocytosis
Synaptotagmins
107946325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMP_MUG190-like
C2
PDZD8_N
SMP_LBD
MMM1
DUF4543
MFS18
Motif
Other DBs
NCBI-GeneID:
107946325
NCBI-ProteinID:
XP_016736082
UniProt:
A0A1U8NAJ3
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Position
D12:49536908..49543674
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AA seq
675 aa
AA seq
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MIFLKPSSYSSSFSFPLLLPLCPCKTNLCFATRNKNNKTPLINRLIPHRKYCLLACAIPS
PNRNRLNVRVARNLVANGFASEFVDGERERENENQESSIQMGSNFGSFEQDPIVGKLRTQ
LGVIHPIPSPPINRNIVGLFVFFFFVGVAFDKIWTSRRRRGKLGALDGDLVRIGGGVWPQ
VPTSFSLFLEKDLQRKESVEWVNMVLGKLWKVYRGGIENWIIGLLQPVIDNLNKPDYVQR
VEIKQFSLGDEPLSVRNVERRTSRRVNDLQYQIGLRYTGGARMLLMLTLKFGIIPIVVPV
GIRDFDIDGELWVKLRLIPTEPFVGAVSWAFVSLPKIKFELSPFRLFNLMAIPVLSMFLR
KLLTVDLPRLFVRPKKIVLDFQNGKAVGPVANDLKSGEIQEEKNKDFVGELSVTLVDARK
LFYVFYGKTDPYVTLSLGDQVIRSKRNSQTTIIGPPGEPIWNQDFHLLVANHRKEKLCIQ
VKDSLGFLDLTIGTGEVDLGTLKDTVPSDQIVVLQGAWGVFGKRSAGEILLRLTYKAYVE
DEEDDRTVAGSVDTDASDDELSDSDEPNVTNVQGVKQFTDETEKESFMDVLAALIVSEEF
QGIVSSEPGSKSFDDISRTGSLKTRFSGVNGESLPSDSDKGSESSGGSILLWFAVITSIS
VLIALGIGGSSFFNP
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgatctttctaaaaccttcttcttattcttccagtttcagcttccctcttcttctgcct
ctttgcccttgtaaaaccaacctctgtttcgcaactaggaataagaataacaagaccccg
ctcatcaatcgcttaatcccacaccggaaatattgtcttcttgcttgtgcaattcccagt
ccaaatcgcaacaggcttaatgtaagggtagctagaaatcttgtagccaatggctttgca
agtgagtttgtggatggggaaagggaaagggaaaatgaaaatcaagaatcttcaatccaa
atgggttcaaatttcggtagtttcgaacaagaccccattgttggcaaattacggactcag
ctaggtgttatccacccaatcccgtcccctccaattaaccgtaacattgttgggttattt
gtttttttcttttttgttggggttgcttttgataaaatctggacttcaaggaggaggagg
ggcaaattgggggctttagatggtgaccttgttagaatcggaggaggggtttggccccaa
gtcccgactagtttttcgttgttcttggaaaaggatttgcaaaggaaagaatcagttgaa
tgggttaatatggtgttggggaagttgtggaaagtttatagaggtgggattgagaattgg
atcattgggttactgcaacctgttattgataatcttaacaaacctgattatgtccagaga
gtggaaattaagcagttttctttaggggatgagcctttgtctgttaggaatgttgagcgt
agaacttcgcggcgagtcaatgatttgcagtatcaaatagggcttcgttatactggtggt
gctcgcatgttgttgatgttaacattaaaatttggcattatcccaattgttgtgccagtt
ggtattcgagattttgacattgatggagaactttgggttaaattgcgattgataccgaca
gaaccttttgttggagctgtgtcgtgggctttcgtctcacttccgaagatcaagtttgag
ttatctccatttcgcttgtttaacttaatggcaattccagttctttcaatgtttttgaga
aaactgctcactgtggatttgcctcgattatttgtccgcccaaagaagattgttctggat
ttccaaaatgggaaagcagttggccctgttgcaaatgatttgaaatcaggagaaattcaa
gaagagaagaacaaggattttgttggagaactatccgtgactcttgtggatgccaggaaa
ctgttttatgttttttatggcaaaactgatccatatgttactctaagcctgggggatcaa
gttatacgcagtaaaaggaacagtcaaaccactattattgggcctcctggtgagccaatt
tggaatcaggattttcatttacttgtggcaaaccatagaaaagaaaaactatgcatccaa
gtgaaagactcccttgggttcttggatttgacaattggtacaggagaggttgatcttggg
actctcaaggacactgttccatcggatcagattgttgtcttgcaaggagcttggggagtg
tttggaaagagatctgctggagaaatattacttcggttaacgtataaagcttatgttgag
gatgaagaagatgacagaactgtggctggatctgttgatacggatgcttcagatgatgaa
ttatctgattctgatgaaccaaatgtgacaaatgtgcagggtgtaaagcaatttacagat
gaaacagagaaggagtcctttatggatgttctagcagctttgattgttagtgaggaattt
caaggcatagtatcatccgaacctgggagcaaatcttttgatgatatatcaagaacagga
tctctgaaaacaagatttagtggtgttaatggggaatctttgccatcagattctgataag
ggttctgaatcatctggaggatcaatcttattatggtttgctgtgattacaagtatatca
gtgttaattgcactcggtatcggtggctcgagtttcttcaacccttga
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