Gossypium hirsutum (upland cotton): 107949823
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Entry
107949823 CDS
T04793
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107949823
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107949823
03012 Translation factors [BR:
ghi03012
]
107949823
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107949823
Translation factors [BR:
ghi03012
]
Eukaryotic type
Release factors
107949823
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
107949823
NCBI-ProteinID:
XP_016740081
UniProt:
A0A1U8NM35
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Position
D03:complement(38067565..38070444)
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AA seq
436 aa
AA seq
DB search
MADGHESDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYSKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPSTSQPNVSGLILAGSADFKTELSQS
DMFDQRLQAKILNVVDVSYGGENGFNQAIELSSEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLKALEMGAVETLIVWENLDINRYQLKNSTTGEITIKHLNKEQEANESNFRD
PVSSADLEVVEKMPLLEWFANEYRQFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RSFDEFSDEEVYDDSE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagacggtcacgagagtgacaagaatattgagatatggaagatcaagaagcttatt
aaagcacttgaagccgctagaggcaacggcaccagcatgatatctctcataatgcctcca
cgtgatcagatttcaagggttaccaagatgcttggagatgaatttggaacagcttcaaac
atcaaaagcagagtcaaccgtcaatccgtgttaggtgctatcacatctgctcagcagagg
ctcaaactttatagtaaggttcctcccaacggacttgtgctctacactggaacaattgtg
actgatgatgggaaagaaaagaaagtcacaattgattttgagcctttcaggcctataaat
gcttctctttatctctgtgacaacaagtttcacacggaggcactgaatgaacttttggag
tcggatgataagtttggctttattgtgatggatggcaatggaactctttttgggacatta
agtggtaacaccagggaggtacttcataagttcagtgttgatcttccaaagaagcatggg
agaggtggacaatcagcccttcgttttgctcgacttcgaatggaaaagcgccacaactat
gtgaggaagacagctgaacttgctactcaattttttatcaacccttccaccagccagcct
aatgtatctggattaatattggctggatcagctgatttcaaaactgagctgagtcaatct
gatatgtttgatcagcggcttcaggctaagattctgaatgtggttgatgtctcttatgga
ggagagaatggtttcaaccaggcaattgagctttcctctgaaatactggcgaatgtgaaa
ttcatacaggagaagcgcttaatagggaaatactttgaggagatcagtcaagatactggg
aagtatgttttcggagtggatgacacactgaaggccttggagatgggagccgttgagaca
cttatagtgtgggaaaatctggacataaatcggtatcagctgaagaatagcactactggt
gaaattaccataaaacatttaaacaaggagcaggaagccaatgagagcaacttccgcgat
ccagtcagctctgcagatctggaggttgttgagaagatgccactgttagagtggtttgct
aatgaatacaggcagtttggctgtagccttgagttcgttaccaacaaatcccaggagggt
tctcagttctgccgtgggtttggcggtattggaggcatccttcgataccaactagacatg
cgatcatttgatgaattttctgatgaagaagtatatgatgattctgaatag
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