Gossypium hirsutum (upland cotton): 107953474
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Entry
107953474 CDS
T04793
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107953474
Chaperones and folding catalysts [BR:
ghi03110
]
Heat shock proteins
HSP100
107953474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
Clp_N
AAA_5
AAA_22
AAA_16
Sigma54_activat
AAA_18
nSTAND3
AAA_14
bpMoxR
AAA_7
IstB_IS21
ATPase_2
RuvB_N
AAA_28
TniB
DUF815
NBD_SMAX1
NACHT
TsaE
RNA_helicase
Zeta_toxin
Roc
AAA_25
ABC_tran
DUF87
Mg_chelatase
AAA_19
DNA_pol3_delta2
Torsin
ResIII
T2SSE
DUF2987
DASH_Spc19
AAA_13
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
107953474
NCBI-ProteinID:
XP_040953282
UniProt:
A0ABM3AEL3
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All DBs
Position
D07:complement(8557053..8560855)
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AA seq
912 aa
AA seq
DB search
MNPDKFTHKTNEALAASHELAMSNGHAQFTPLHLAVSLISDPTGIFPQSISNAGGENAAQ
SAERIFNQALKKLPSQSPPPDEIPASTSLIKVLRRAQAAQKARGDTHLAVDQLILGLLED
SQIADLIKEAGVAPAKVKSEVEKLRGKEGRKVESASGDTTFQALKTYGRDLVEQAGKLDP
VIGRDEEIRRVIRILSRRTKNNPVLIGEPGVGKTAVVEGLAQRIVRGDVPSNLADVRVIA
LDMGALVAGAKYRGEFEERLKAVLKEVEEAEGKVILFIDEIHLVLGAGRTEGSMDAANLF
KPMLARGQLRCIGATTLEEYRKYVEKDAAFERRFQQVYVAEPSIADTISILRGLKEKYEG
HHGVRIQDRALVVASQLSSRYITGRHLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEVELHALEKEKDKASKARLVEVRKELDDLRDKLQPLMMKYRKEKQRVDEIRRLKQKR
EELMFALQEAERRYDLARAADLRYGAIQEVESAIAQLEGTTDENIMLTETVGPEHIAEVV
SRWTGIPVTRLGQNEKERLIGLAERLHQRVVGQNQAVEAVAEAVLRSRAGLGRPQQPTGS
FLFLGPTGVGKTELAKALAEQLFDDENQLIRIDMSEYMEQHSVARLIGAPPGYVGHEEGG
QLTEAVRRRPYSVVLFDEVEKAHISVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIMTSNL
GAEHLLSGLSGKSSMQVARDRVLQEVRRHFRPELLNRLDEIVVFDPLAHDQLRKVARLQM
KDVAVRLAERGIALAVTDAALDYILAESYDPVYGARPIRRWLEKRVVTELSRMLVKEEID
ENSTVYVDASPKRNELVYRVEKNGGLVNAATGQKSEVLIQIPNGQPRSDAAQAVKKMKVE
EMDEDEDEEMDM
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccgataaattcactcacaagacaaatgaagctctggccgcctctcacgagcta
gcgatgagcaacggccatgcccaattcacccctcttcaccttgctgtttctttgatctcc
gatcccactggcattttccctcaatctatctccaatgccggtggtgaaaacgctgctcaa
tccgccgagaggatctttaatcaggccttaaagaaactcccatcacagtcgcctccgccg
gatgaaatccccgccagcacttcccttattaaggtactccgtcgtgcacaagctgcgcaa
aaggcacgcggcgacacccatttggccgtcgatcaattgattctcggccttctcgaggat
tcccagatcgctgatttgataaaggaagctggtgttgctccggcaaaagtgaaatccgaa
gtagaaaagcttcgaggaaaggaagggaggaaggtggaaagtgcttcaggggatactaca
tttcaagctctaaagacttatggccgtgatcttgttgagcaagcaggaaaacttgatccg
gtgataggccgagatgaggaaatccgaagggttattcggattctatcaaggagaacgaag
aacaatccggttctcataggagaaccgggtgtcggtaaaactgcagtcgtagagggcttg
gctcaaaggattgttagaggggatgttcctagtaatcttgctgatgtgagagttatcgcg
ttggacatgggtgcgttagttgctggagcaaaatatcgaggtgaattcgaggaaagattg
aaggctgtattgaaagaagttgaggaagccgaagggaaagtgattctctttatcgatgaa
atacatttggtacttggggctggtcgaaccgagggctccatggatgcagctaacctcttt
aagcctatgcttgctcgaggtcaacttcgatgtattggtgcaacgacactggaggaatat
aggaagtatgttgagaaggatgctgcattcgaaagaaggttccaacaggtttatgtcgct
gagccgagcattgctgatacaatcagcatccttcgagggttgaaagaaaaatacgaaggt
caccatggtgttcggatacaagaccgcgctttggtggtggcatcacagttatcgagtcgc
tacattacaggacgtcatcttcctgacaaggcgattgacttagtcgacgaagcttgtgcg
aatgtgagagttcagcttgacagtcagcctgaagagattgataatctcgaacgaaaacga
atgcaattagaagtcgagctgcatgctttggaaaaggagaaggataaagcgagcaaagct
agactggttgaagtacggaaggagcttgatgacttgcgagacaagcttcagccgctgatg
atgaaatataggaaggagaagcaaagggttgatgagatccgacgattgaaacagaagaga
gaagagctcatgttcgccttacaggaggctgaaagaagatatgatttggcaagagctgcg
gatttgagatatggagcaattcaggaagtggaatctgcgatagcgcagcttgaaggaacc
acagatgaaaatataatgttaacggaaacggttggacctgaacatattgcagaggttgta
agccgctggactggcattcctgtcacgaggctcggacagaatgagaaagagaggttaatt
gggcttgctgagaggctgcaccaaagagtggtgggacaaaatcaagcggttgaggctgtt
gcagaggctgttttgaggtcgagagctggattaggaagacctcaacaaccgactggctcg
ttccttttcttgggtccgactggtgttggaaaaacagaacttgctaaggcactggcagaa
caactcttcgatgacgagaaccagcttatcaggattgacatgtccgagtacatggagcaa
cactcagttgctcgacttatcggtgcaccaccagggtatgtcggacatgaggaaggtggg
caactaaccgaggctgtaaggcgaaggccatacagtgttgtactatttgatgaagttgag
aaagcacatatctctgtcttcaacacactgcttcaagtgctggatgatggtcgattaacc
gatggccaaggccgcactgtcgacttcagaaacacggtgatcatcatgacatcaaacctt
ggagccgaacatcttctgtctgggcttagtggaaaatcttctatgcaagttgcacgcgat
cgcgtattgcaagaggttcggcgacactttaggccagagttgcttaacagacttgatgag
attgttgtttttgatccgctcgcacacgaccaattgaggaaagttgctaggttgcaaatg
aaggatgtggcagtccgacttgctgagaggggaattgcattggctgtaacggatgcagct
ctggactacatattagcagagagttatgatccagtttacggtgcgaggcctataaggaga
tggctggagaaaagggtcgtaacggagctgtcgagaatgttagtgaaagaagaaattgat
gagaactccacagtgtatgttgatgcgagtcccaaaagaaacgagttggtgtatcgggtg
gagaaaaatggaggcttagttaacgctgccaccggccaaaaatcagaggtattgatccaa
atcccaaacgggcagccaaggagcgatgctgcgcaggcagtgaagaagatgaaggttgaa
gagatggatgaggatgaggatgaggagatggatatgtaa
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integrated database retrieval system
