Gossypium hirsutum (upland cotton): 107958460
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Entry
107958460 CDS
T04793
Name
(RefSeq) probable GMP synthase [glutamine-hydrolyzing]
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107958460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107958460
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
107958460
DNA repair and recombination proteins [BR:
ghi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107958460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
107958460
NCBI-ProteinID:
XP_016749726
UniProt:
A0A1U8PEU4
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Position
A05:11559715..11564945
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AA seq
371 aa
AA seq
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MSGPPRVRSANTATEMEARSVLGPAGNKVPTKPASKSTKKPVQQTPEGKDKEKVKELLTP
QKKPTPAPQSLTLTASILRQQERMAGNFSMSLSCLSDGGASSSSAGSSSSGMTGGGGRRG
GKHGIGVGVRRKQSGPKGESGVIVVDSWEGGCLDNKKRCGWVTTNSDLCYVAFHDEEWGV
PAHDDKKLFELLSLSGALAELTWPTILSKRHLFRDTFLEFDPRAVSKLSEKKIGAPGSPA
SSLLSELKIRGIIENGHQICKVIDEFGSFDKYIWSFVNHKPIVGQFRYPRQVPVKSPKSE
VISKDLIRRGFRSVGPTVVYSFMQVAGLTNDHLMSCFRFQECITGVESRGKVNNDEANDE
TKKVEETTALG
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggaccgccgagggtaaggtcggctaacactgcaacggaaatggaagcgaggtcg
gttctgggtccggctgggaacaaggtcccgacaaaaccggcatcaaaatcgaccaaaaaa
ccagtccagcaaacacctgagggaaaagacaaagagaaggttaaagaactgttaactcca
cagaagaaaccaacgccggcccctcaatcgttgactttgactgcatcgattttgaggcag
caggaaaggatggcggggaatttttcgatgagtctgtcgtgcttgtcggacggaggagca
tcgtcttcatcggcagggtcgtcgtcgagtgggatgactggcggaggagggcggcggggt
ggtaaacatggaatcggtgttggagtgaggaggaagcaaagtgggccgaaaggggagagt
ggggtgattgtggtggattcatgggaaggtggttgcttggataacaagaaaagatgtgga
tgggtcacaaccaattcggatctttgttatgtcgcttttcatgatgaagaatggggagtt
ccagctcatgatgacaagaaactgtttgaattgctcagcttatcaggtgctttggctgaa
ctgacatggcctaccatccttagcaaaagacatttgtttagggacacctttctggagttt
gatccaagggctgtttctaaactaagtgagaaaaagataggagctcctggaagccctgcc
agctctctgctatcagaactcaagattcgaggcatcattgaaaatggacaccaaatatgc
aaggtaatagatgagtttgggtcatttgacaagtacatttggagcttcgttaatcacaag
ccaatagttggtcaatttcggtaccctcggcaggttccagtcaagagtccaaaatcagag
gtgataagcaaagacctcatcagaagaggattccgaagcgtagggcctacagttgtatat
tcattcatgcaagtggctggattgactaatgaccatcttatgagttgctttaggtttcaa
gaatgcataacaggggtggaatcaaggggaaaagttaacaatgatgaagcaaatgatgaa
actaaaaaagttgaggagacgactgccttgggataa
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