Gossypium hirsutum (upland cotton): 107961684
Help
Entry
107961684 CDS
T04793
Name
(RefSeq) chaperone protein ClpB4, mitochondrial isoform X1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
107961684
Chaperones and folding catalysts [BR:
ghi03110
]
Heat shock proteins
HSP100
107961684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
AAA
ClpB_D2-small
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
Mg_chelatase
Zeta_toxin
ABC_tran
AAA_7
TniB
AAA_24
AAA_18
Torsin
NACHT
NBD_SMAX1
PduV-EutP
Motif
Other DBs
NCBI-GeneID:
107961684
NCBI-ProteinID:
XP_016753249
UniProt:
A0A1U8PSJ6
LinkDB
All DBs
Position
A06:complement(40215495..40221529)
Genome browser
AA seq
972 aa
AA seq
DB search
MASRRLTRSAFLAIKASKASTRYLFRARAISAAACTLRNSLISPHRSQNFNEVAENNGGF
FSLTRSYHSSPPLYSSATSPAQINQSDYTDMAWEGLVGAVQAAKDSKQQMVEAEHLMKAL
LEQKDGLARRIFTKAGLDNTSVLQATDDFISKQPKVMDTSNSIMGSNLSSLLDNSRKHKK
EMGDNFVSVEHFVLAFTSDKRFGQQLFKNLQLSEHALKDAIKAVRGNQRVTDQNPEGKYE
ALEKYGNDLTELAKRGKLDPVIGRDDEIRRCIQILSRRTKNNPVIIGEPGVGKTAIAEGL
AQRIVRGDVPEPLLNRKLISLDMGSLLAGAKFRGDFEERLKAVLKEVTASNGKIILFIDE
IHTVVGAGATGGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVFCG
QPSVEDTVSILRGLRERYELHHGVKISDSALVSAAVLADRYITERFLPDKAIDLVDEAAA
KLKMEITSKPTELDEIDRAVLKLEMEKLSLKNDTDKASKERLSKLENDLNSLKQKQKELT
EQWDHEKALITRIRSVKEEIDRVNQEMEAAEREYDLSRAAELKYGTLMSLQRQLEEAEKN
LAEFQKSGKSLLREEVTDLDIAEIVSKWTGIPLSNLQQSERDKLVLLEKELHKRVIGQDI
AVKSVADAIRRSRAGLSDPNRPIASFMFMGPTGVGKTELAKALAGFLFNTENALVRIDMS
EYMEKHAVSRLVGAPPGYVGYEEGGQLTEVVRRRPYSVVLFDEIEKAHHDVFNILLQLLD
DGRITDSQGRTVSFTNCVVIMTSNIGSHYILETLQSTYDSKDAVYNVMKKQVVELARQTF
RPEFMNRIDEYIVFQPLDSKEIGKIVELQMVRLKDRLRQKKIYLHYTKEAVELLGTLGFD
PNFGARPVKRVIQQLVENEVAMGVMRGDFKEEDSIIVDVESLPSVKDLPPQDKLCIKKLE
SSSPLDVMVAND
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaagaaggctaacaaggtccgcttttttggccattaaagcatcaaaagcctca
actcgttacctgttccgcgctcgcgccatctccgccgctgcttgtactttgcgtaattcc
ctcatttcgcctcatcggtctcaaaatttcaacgaagtggcggagaacaacggcggcttc
ttctctctcactcgcagctatcactcttctcctccactttactcttctgccactagccct
gcgcagatcaaccaatcagattacactgatatggcctgggagggccttgttggggctgtt
caagcggcaaaggatagcaaacagcaaatggtggaagctgaacacttaatgaaagctctt
ttagaacagaaggatgggttggctagaaggattttcacaaaagcagggcttgacaacact
tctgttctgcaggctaccgatgactttatatcgaagcagcctaaagtgatggacacaagt
aactctataatgggatcaaatcttagctcccttttagacaattctcgaaagcataagaaa
gagatgggagataattttgtttcggtggaacattttgtcctagcatttacctcagataag
aggtttgggcagcagttgttcaagaacctccagcttagtgagcatgctttgaaggatgcc
attaaagctgttcgtggaaatcagcgtgtaactgatcaaaatcctgaaggaaaatatgag
gcacttgaaaagtatgggaatgacttgactgagcttgctaagcgtggcaaactagatcct
gttattggtcgtgatgatgaaataaggcggtgcatccagatactatcaagacgaacaaaa
aataaccctgttataattggggagcctggtgtggggaaaacagcaattgctgaaggattg
gctcaaaggattgtacggggagatgttcctgaaccgctgttaaaccgaaagttgatctcc
ctagacatgggttccttgttggctggtgccaagtttcgtggagattttgaggaaaggttg
aaagctgtgctgaaggaagttactgcttcaaatggcaagattattttattcattgatgag
atacacacggttgttggtgcaggggctactggtggcgcaatggatgctgggaatttgtta
aagccaatgctggggagaggtgagctgcgatgcataggagctactacattggatgagtac
aggaaatacattgagaaggatcctgcacttgagcgcagatttcaacaagtgttttgtggt
cagccatctgttgaagatacagtatcaattcttcgaggcttgcgtgaacgctatgagcta
catcatggtgttaaaatatctgacagtgctcttgtttcagcggcagttcttgctgaccgc
tatataacagaacgttttctgcctgacaaagccattgatcttgttgatgaagctgctgca
aaacttaagatggagatcacttctaagcccacagagttggatgagatagatagagctgtt
ctgaagttggagatggagaagctatcccttaaaaatgacactgataaagcatccaaagaa
aggttaagcaagctggaaaatgatttgaactcactgaaacagaaacagaaagaattaact
gaacagtgggatcatgagaaggctcttattactagaatccgatcagtgaaagaagagatt
gatagagttaatcaagaaatggaagctgctgaacgtgagtatgatttaagtcgtgctgcc
gagcttaaatatggaactttaatgtctcttcaacgccagttagaagaggctgaaaagaat
cttgctgagtttcaaaagtctgggaagtctttgctccgtgaagaggttactgatcttgat
attgctgaaattgttagcaaatggaccggcatacctttatcaaaccttcaacagtcagaa
agggacaagctagtcttgctggaaaaggaacttcataagagagtgattggtcaagatatt
gcggtaaaatcggtagccgatgcaatcagacgctcgagggcaggattatctgacccaaat
cgtccaatagctagtttcatgttcatgggccccactggtgttgggaaaactgagcttgca
aaggctctagctggtttccttttcaatacagaaaatgctctggtcagaattgatatgagt
gagtacatggaaaagcatgcagtttcacgcttggtaggggcaccaccgggctatgttggt
tatgaagagggcggacaactcactgaagttgttcgtagaaggccctattctgtagttctt
tttgatgaaattgagaaagctcatcatgacgtattcaatattttgctacagctattggat
gatggaaggataactgactctcagggaaggactgttagttttacaaattgtgtagtaata
atgacttcaaatatcggctctcactacattttggaaactctccagtctacatatgacagc
aaggatgctgtttacaatgtgatgaaaaaacaggtggttgagttggcaagacagactttc
cgcccggagttcatgaaccggattgatgagtatattgttttccagcctcttgactccaaa
gaaatcggtaaaatagttgagttacagatggtgcggttaaaagatagactgcgacagaag
aaaatctatctgcactacacaaaggaagctgttgaacttctggggacactgggatttgac
cctaactttggagcaaggccagttaagagggtgatacaacaattagtggagaacgaagtt
gcaatgggagtgatgagaggagatttcaaggaggaagactcgatcattgttgatgtggag
tccttgccgtcggtgaaggaccttcccccccaagataagttatgcattaagaaattggag
agcagttctccattagatgttatggttgcaaatgattag
DBGET
integrated database retrieval system
