Gossypium hirsutum (upland cotton): 121208480
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Entry
121208480 CDS
T04793
Name
(RefSeq) importin beta-like SAD2
KO
K20223
importin-7
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121208480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ghi03009
]
121208480
Ribosome biogenesis [BR:
ghi03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
121208480
Pre-60S particles
121208480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
Cse1
TPR_IPO11
HEAT_IPO9_c
ParcG
Xpo1
TPR_IPO5
Motif
Other DBs
NCBI-GeneID:
121208480
NCBI-ProteinID:
XP_040935146
UniProt:
A0ABM2YXE1
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Position
A10:complement(77970935..77979858)
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AA seq
1036 aa
AA seq
DB search
MDLPSLTLVLQAALSSNPAERKAAEQSLNQFQYTPQHLVRLLQIIVDNNRDIAVRQFASI
HFKNFIAKNWAPHDPNEQQKISPSDKDVVRDNILVYVAEVPPLLRVQLGECLKTIINADY
PEHWLRLLDWVKHNLQDQLVYGALFVLRILARKYEFKSEEERTPVQHIVEETFPHLLNIF
NKLVQIDKPSVEVADLIKLVCKIFWSSIYLEIPKQLLDPNVFNAWMMLFLNVLERPVPQE
GQPLDPELRKSWGWWKVKKWTVHILNRLFTRFGDLKLRNPENRAFAQMFQKNYAGKVLEC
HLNLLGIIRVGGYLPDRVTNLVLQYLSSSISKNSMYTLLQPQLDVLLFEIVFPLMCFNDN
DQKLWEEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVEIFKRY
DSAPVEFKPYRQKDGALLAVGALCDKLKQTEPYKSELEHMLMQHVFPEFRSPVGHLRAKA
AWVAGQYAHINFSDQNNFRQALHSIFSGLRDAELPVRVDSVFALRSFVEACRDLNEIRPI
LPQLLDEIFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEAD
DEADDPGALAAVGCLRAISTILESVSRLPHLFVQVEPTLLPIMRRMLTTDGQEVFEEVLE
IVSYMTFFSPTISLDMWSLWPLMIEALADWAIDFFPNILVPLDNYISRGTAHFLNCKEPD
YQQSLWNMISSIMTDKNLEDNDIEPAPKLIEVLFQNCRGQVDHWVEPYLRITLDRLHRTE
KSRLKCLLVQVIANAVYYNAVLTLSILNKFCVTLEVFNLWFQLLQQVRRSGRRVNFKREH
DKKVCCLGLTSLLALPGEQLDGEALGRVFRATLDLLVAYKDQVAEAAKEEETEDDDGMDG
FESDDDDDDADGSDKEMGVDAEEGDEADSIRLQKLAAQAKAFHENDDDDDDDYSDDDFSD
DEELQSPIDEVDPFVFFVDTVKVLQASDPMRFQNLTQTLDFHYQALANGVAPHAEQRRAE
IGKEKMEKASAATVAS
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atggatcttccaagtcttactcttgttcttcaagctgctcttagttccaatcctgctgaa
cgcaaagctgctgaacaaagtcttaatcagttccagtatacgcctcagcatctggtgaga
ctattgcagatcattgttgataataatcgcgatatcgcggttcgacaatttgcttctatt
cattttaagaacttcattgctaagaattgggctcctcatgatccaaatgagcaacaaaaa
atttctccaagtgataaggatgtggttcgcgataatattcttgtgtatgtggctgaagtt
cctcctttgttgagggtgcaattgggtgagtgtctcaagaccattatcaatgctgactat
ccggagcattggctgcgtcttctcgactgggtaaagcataacctacaagatcagctggtt
tatggggctttgtttgtgttgcggattcttgctaggaaatatgagttcaagtcggaggag
gagagaactcctgttcaacacattgttgaagaaacatttcctcatcttctcaatatattt
aataaacttgtgcagattgacaaaccatcagtggaagtagcagatctaatcaagcttgtt
tgcaaaattttctggtcatcaatctatttggagattccaaagcagttacttgatccaaat
gtgttcaatgcttggatgatgcttttcttaaatgttctggagaggcctgtacctcaggaa
ggccagcctttagatcctgagctcaggaaatcatgggggtggtggaaggtgaagaaatgg
accgtacatattttaaataggttattcactcggtttggagatttgaagcttaggaatcca
gaaaacagggcttttgctcaaatgtttcagaagaattatgcaggaaaagttttggaatgc
cacttaaatttattgggcattattcgtgttggaggctatcttcctgacagagttaccaac
cttgttcttcaatatctaagcagcagcatctcgaagaatagcatgtatactttgttgcag
ccacagcttgatgtcctccttttcgaaatagttttccctctcatgtgcttcaatgacaat
gatcaaaagctttgggaagaagatccacatgagtatgtaaggaagggctacgatataatt
gaagatttatatagtccaaggaccgcttctatggattttgtcagtgagttagtaagaaaa
cgtggaaaagagaatcttcaaaagtttattcaattcattgtggaaattttcaagagatat
gattcagcaccagtagaatttaaaccctatcgacagaaagatggtgccctccttgctgtt
ggagcactttgtgataaactgaaacaaactgagccctacaaatctgagttggagcatatg
ttgatgcaacatgtttttccagagttccgaagtcctgttggtcatcttagagcgaaggct
gcatgggtagcaggacagtatgcccatataaatttctctgaccagaataatttccgccaa
gcactgcatagtattttttccgggttgcgtgatgcagagcttcctgttcgtgttgattca
gtttttgcattaagatcgtttgtagaagcttgcagagatttaaatgagattcgtcctatt
cttcctcaattacttgatgagatctttaaacttatgaatgaagttgagaatgaggacctt
gtttttactctggagactattgttgacaagtttggagaggagatggcgccttatgctctt
ggtttatgtcagaatttggcagctgcattctggaggtgtatgaacactgctgaagctgat
gatgaagctgatgatcctggtgctctggcggcagttggttgtttgcgtgccataagcaca
atacttgaatcagttagtaggcttccacacctttttgttcaggtggagccaactttgctt
ccaatcatgcgaagaatgttgacaactgatggacaagaggtttttgaagaagtcttggag
attgtttcatacatgactttcttttctccaactatttcattggatatgtggagcctttgg
cctttgatgatcgaagcattagctgattgggctatagacttctttccaaatattttggtt
cctttggacaactatatatccaggggaactgctcattttcttaattgcaaggaaccagac
taccagcaaagtctttggaatatgatttcttctatcatgacagataaaaatttagaggac
aacgacattgagccagctccaaagctgatagaagtattgtttcaaaactgtagagggcaa
gtagatcattgggttgaaccatacctgagaatcacacttgatcgattgcatcgaacggag
aaatcaaggttgaaatgtcttcttgtacaagtgattgccaatgcagtatattataatgcg
gttttgacactcagcatattgaacaagttttgtgttacattggaagtgttcaacctttgg
ttccagttgttgcagcaagttaggaggagcggtcgacgggttaattttaagcgggaacat
gataagaaagtttgctgcctgggccttacgtcactgcttgcacttcctggtgaacagtta
gatggggaggctcttggacgtgtgttcagggccacccttgatctccttgttgcatacaag
gatcaagttgcagaagctgcaaaggaggaagagactgaagatgatgatggtatggatggt
tttgagtctgatgatgatgacgacgatgctgatggttctgacaaggaaatgggagttgat
gcagaggagggcgatgaagcagatagcatcaggcttcaaaaattagctgcccaggctaag
gctttccatgaaaatgatgatgatgacgatgatgactactccgatgatgattttagtgat
gatgaggagctacagtctccaattgatgaagtggacccttttgttttctttgtggatacg
gtcaaagttttgcaagcatcggatcctatgaggttccagaaccttacacagacactggat
tttcattatcaagctcttgcgaacggtgttgctccgcatgctgaacagaggagagcagag
attggaaaggagaaaatggagaaggcatctgctgccactgttgcatcatga
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