Gossypium hirsutum (upland cotton): 121219392
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Entry
121219392 CDS
T04793
Name
(RefSeq) tRNase Z TRZ2, chloroplastic-like
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
121219392
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
121219392
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
121219392
Prokaryotic type
121219392
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
121219392
NCBI-ProteinID:
XP_040953408
UniProt:
A0ABM3AF09
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Position
D07:complement(11584311..11588781)
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AA seq
366 aa
AA seq
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MQFRFNSISNKQEMQASLPIVPSKIPSIFPFHHPIYPPHPPHKSLSFQTQASPFKSLKTS
GYLSTISRAIDEEEEYRKARAAVTRKGIEVEGYFIEGLSIGGHETCVIVPELKSAFDIGR
CPARAIHQNFVFITHAHLDHIGGLPMYVASRGLYNLKPPTVFVPPCIKEDVEKLLDIHRT
MGQVELNLDLVALDVGETYELRNDIVVRPFRTHHVIPSQGYVIYSVRKKLKKQYIHLKGK
QIEKLKKSGVEITDIVLSPEVAFTGDTTAEYMRDPRNADALRAKILITEATFLDDGYSID
HARQHGHTHLSEIIENVQWIRNKAVLLTHFSSRYSIEDIRQAVSKLQSKLSAKVVPLTEG
FKSMHT
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttcgcttcaattccatctcaaataaacaagaaatgcaagcctctctccccatt
gtaccctccaaaatcccttcaattttcccattccaccaccccatttatccacctcatcca
ccccacaaaagcctctctttccaaacccaagccagcccctttaaatccctcaaaacctcc
ggctatttatcaaccatcagccgtgctatagatgaagaagaagagtaccgtaaagccaga
gctgctgtcacgagaaagggtattgaagttgaaggctacttcattgaaggactctctatt
ggtggccatgaaacctgtgtcatagtccctgaattgaagtctgcttttgatatcgggagg
tgccctgctcgtgctattcatcagaattttgttttcatcactcatgctcatcttgaccac
attggtgggctgccgatgtatgtggctagccgtggtttgtataacttaaagcctccgacg
gtatttgtacctccatgtattaaagaagatgtggagaagctgttggatattcacaggaca
atgggacaagtggaactaaaccttgatttggtcgcacttgatgttggtgaaacatatgaa
ctacggaatgacattgttgtccgaccatttagaactcaccatgttataccaagccagggt
tatgttatatactctgttagaaaaaagctgaagaagcagtacattcatctgaaagggaaa
cagatcgagaaattgaagaagtctggtgttgagatcacagacattgtattgtctccggag
gtggcttttacaggagatacaacagcagaatacatgcgtgatccacgtaatgcggatgca
ttgagggccaaaattctcataactgaggcaacgttccttgatgatggttatagcattgat
catgcaagacaacacggtcatacacatttatcagagatcattgaaaatgttcagtggatc
aggaacaaagctgtcttgttaactcatttctcttcccgctatagtatagaggacattcga
caagctgtttcaaagttgcagtctaaattatcagcaaaggtcgttcctctaacagagggt
ttcaaatcaatgcacacatag
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