Gossypium hirsutum (upland cotton): 121221093
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Entry
121221093 CDS
T04793
Name
(RefSeq) chaperone protein ClpB3, chloroplastic-like
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ghi03110
]
121221093
Chaperones and folding catalysts [BR:
ghi03110
]
Heat shock proteins
HSP100
121221093
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
Clp_N
ClpB_D2-small
AAA
AAA_5
AAA_16
AAA_22
Sigma54_activat
nSTAND3
AAA_14
AAA_18
IstB_IS21
Zeta_toxin
AAA_7
TniB
AAA_28
RNA_helicase
Mg_chelatase
AAA_24
NACHT
ResIII
AAA_25
ABC_tran
NBD_SMAX1
Torsin
KIF9
APG6_N
Laminin_II
Motif
Other DBs
NCBI-GeneID:
121221093
NCBI-ProteinID:
XP_040957501
UniProt:
A0ABM3ARL1
LinkDB
All DBs
Position
D09:2620517..2626009
Genome browser
AA seq
978 aa
AA seq
DB search
MAASSSTTSMASVNGFSFCATRSVSNINNLLLTHPRLSLSFPSKPNSLKSFKPLQLRKNG
VFERFSRTSSRPFVVRCEASTGKITQQDFTEMAWQAIVSSPDVAKENKHQIVETEHLMKA
LLEQKNGLARRIFLKVGVDNTRLLEATDKFIQRQPKVLGESAGSMLGRDLEALMQRAREY
KKEYGDSFVSVEHLVLGFTQDRRFGKQLFKDFQISNQALKSAIESIRGRQSVTDQDPEGK
YEALEKYGKDLTAMAREGKLDPVIGRDDEIRRCIQILSRRTKNNPVLIGEPGVGKTAISE
GLAQRIVQGDVPQALMNRKLISLDMGALIAGAKYRGEFEDRLKAVLREVTDSEGQIILFI
DEIHTVVGAGATNGAMDAGNLLKPMLGRGELRCIGATTLDEYRKYIEKDPALERRFQQVY
VDQPTVEDTISILRGLRERYELHHGVRISDSALVEAAILSDRYISGRFLPDKAIDLVDEA
AAKLKMEITSKPTALDEINRSVLKLEMERLSLTNDTDKASRDRLSRLEAELALLKERQSE
LTEQWEHEKSVMTNIQSIKEEIDRVNVEIQQAEREYDLNRAAELKYGSLNSLQRQLADAE
KELDEYMKSGKSMLREEVTGNDIAEVVSKWTGIPISKLQQSEREKLLYLEEVLHKRVVGQ
DPAVRSVAEAIQRSRAGLSDPRRPIASFMFMGPTGVGKTELAKALASYLFNTEEALVRID
MSEYMEKHAVSRLIGAPPGYVGYEEGGQLTETVRRRPYAVILFDEIEKAHGDVFNVFLQI
LDDGRVTDSQGRTVSFTNTVIIMTSNVGSQYILNSDEDTPKDLAYETIKQRVMEAARAIF
RPEFMNRVDEYIVFQPLDREQISSIVRLQLERVQNRIADRKIKLQVTDSAIQLLGNLGYD
PNYGARPVKRVIQQNVENELAKGILRGEFKDEDTILVDTELTAFANGQLPQQKLVFKKLN
NDSDTQATGSQEALSQTV
NT seq
2937 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcttcttctactacttcaatggcgtctgttaatggtttcagtttttgtgct
acacgttctgtttctaatataaacaatctccttttaactcacccacgcctttctttgagc
tttccttcaaaacccaattcattgaaatcctttaaaccacttcagttaaggaaaaatggg
gtttttgagaggttttcaaggacttcttcaaggcctttcgttgttcgttgtgaagcttca
actgggaagattacacaacaggacttcactgaaatggcctggcaagccattgtttcttca
ccagatgtggctaaagagaataagcatcaaatagtggagactgaacacttgatgaaagct
ctattggagcagaagaatggtcttgctcggcgaatatttttgaaagtcggagttgacaat
actcgccttctcgaagcgactgataagttcatccaacgccagccgaaggttttgggtgaa
tctgctggttcaatgttaggacgtgatttggaagcactgatgcagcgagcaagagagtac
aaaaaggagtacggggattcgtttgtttctgtcgagcatttggttcttggatttacacaa
gatcggcgttttgggaagcagttgttcaaggatttccagatatccaaccaagccttgaaa
tccgcaatagaatctattaggggacgtcagtcagttaccgaccaagaccccgaaggaaag
tatgaagcgttggagaagtatgggaaagatctaacagcaatggcgagagaaggaaagctt
gatccagttattggaagagatgatgaaatacgtaggtgcattcaaatcctttctaggaga
acaaagaacaaccctgtgctcattggtgaaccgggtgtcggtaaaactgcaatttctgaa
gggcttgcccaaagaatcgttcaaggggatgtccctcaggctttgatgaaccgtaagctt
atctcactcgacatgggtgcactcatagctggggctaaatatcgaggagagtttgaagac
agactgaaggctgtacttcgggaagtcactgattcagaaggccaaattatcctcttcatt
gatgagattcacacagttgttggggcaggtgccaccaatggtgcaatggacgcaggcaat
ctgttgaagcctatgcttggtcggggagaactgcgatgtattggggcaacgactctagat
gaatatcgtaaatacattgagaaagatcctgccctggaacgtcgtttccagcaggtttat
gttgatcaaccaacagtagaagatacaatttctattctccgggggcttcgtgagagatat
gagcttcatcatggtgtccgtatttctgacagtgcacttgtggaggctgcaatcttgtct
gaccgttacattagtggccgatttttacctgacaaagctattgatttagtagatgaagca
gctgctaaattgaaaatggaaatcacttcaaaacctactgccctcgatgagattaatcgt
tcggtactgaagttggaaatggagaggttgtctctcacaaatgatactgataaagcttca
agagatagactgagccgccttgaagctgagttggcgctcttaaaggagagacagtccgag
ttgactgaacaatgggagcatgagaagtctgtaatgacaaacattcagtcgatcaaggaa
gagattgatagggtcaatgttgagattcagcaggccgagcgggagtatgatctcaatcga
gctgctgagctgaagtatggaagtctgaactctttgcagcgccaacttgctgacgctgaa
aaagaattagatgagtatatgaaatctggaaaatcgatgctaagagaagaagttacagga
aacgatattgccgaagtagttagtaaatggactggcataccgatttccaagcttcaacaa
tctgagagggagaaactattatatttagaagaagtgctgcataaacgtgtcgtaggtcaa
gatcctgcggtcagatccgtagctgaggccattcaacgatctcgagctggtctctcagat
ccccgtcgtccaattgccagtttcatgtttatgggtcctactggtgtagggaaaacggaa
ctagcaaaagcacttgcatcttacttgtttaatacggaagaagcacttgttcgaatcgat
atgagtgagtatatggaaaaacatgcggtttcaagacttataggtgctccacctggttat
gttgggtatgaagaaggaggacagctgacagaaacagttcgccggaggccctatgctgta
attctttttgatgagatcgagaaagctcatggtgatgtatttaatgttttccttcaaatt
ttggatgatgggagagtcactgattcacaaggtcgtactgtgagctttaccaacactgtc
atcattatgacttcgaatgtgggttcacaatacattctaaactcggatgaagacacacct
aaagacttagcttatgaaactatcaagcagagggtaatggaagctgcaagagctatcttt
cgacctgagttcatgaatcgtgttgacgagtatatagtgttccaacctttggaccgcgaa
caaataagcagtattgtgagattacagctggaacgtgtgcaaaataggattgcagatagg
aaaataaaacttcaggtaacggacagtgccattcaacttctcggaaatcttggttatgat
ccaaactacggtgctagaccggtgaaacgagtgattcagcagaacgttgaaaacgaactt
gccaaaggcatattgagaggagagttcaaagatgaggatacaatcttggtagacaccgag
ctaactgcattcgcaaatggtcaactcccccagcaaaagctagtcttcaagaaactcaat
aatgattccgatactcaagcaaccggcagtcaagaagctttatctcagactgtctga
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