KEGG   Gossypium hirsutum (upland cotton): 121221099
Entry
121221099         CDS       T04793                                 
Name
(RefSeq) probable ubiquitin conjugation factor E4
  KO
K10597  ubiquitin conjugation factor E4 B [EC:2.3.2.27]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
ghi04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    121221099
   04120 Ubiquitin mediated proteolysis
    121221099
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    121221099
Enzymes [BR:ghi01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     121221099
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  U-box type E3
   121221099
SSDB
Motif
Pfam: Ufd2P_core U-box
Other DBs
NCBI-GeneID: 121221099
NCBI-ProteinID: XP_040957510
LinkDB
Position
D09:complement(2811384..2818107)
AA seq 1053 aa
MATQKPQRAPEEIEDMILRKIFLVTLKENPENPSSSSSDPRVVYLEMTAAEILSEGKSLL
LSRDLMERVLIDRLSGEFPNSEPPFNYLIGCYKRAHEEIKKISNMKDKTLRSGMESAAKQ
AKKLAVSYARIHLGNPDLFSNGNLKDSNPKAGSSLSSSSPLFPLVFAEVSSGVMLDGFGG
NDFGSRVDCPPGFLEDFFKDSDFDTLDPILKGLYEDLRGSVLKVSALGNFQQPLRALLYL
VKFPVGAKSLVNHPWWIPKGVYLNGRVIEMTSILGPFFHVSALPDHTIFKSQPDVGQQCF
SDASTRRAADLLSSFTTIKTLMNTLYDGLAEVLLCLLKNTETRDSVLEYLAEVINKNASR
AHIQVDPISCASSGMFVNLSAVMLRLSEPFLDANLTKRDKIDPTYVFYCSRLDLRGLTAL
HATSEEVAEWIDKDNPVKTDGSGLNNDGENSLRQLQEASSSGSTPNVKPTRSSSEKAKYP
FICECFFMTARVLNLGLLKAFSDFKHLVQDISRSEDTLATLKAMQGQAPSPQLELDISRL
EKEIELYSQEKFCYEAQILRDGALIQQALSFYRLMVVWLVGLVGGFKMPLPPTCPMEFAS
MPEHFVEDAMELLIFASRIPKALDGVHSYVLDDFMKFIIMFMASPQFIKNPYLRAKMVEV
LNCWMPRRSGSSATSTLFEVHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAE
LLEYLWQVPSHCNAWKQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMS
NTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVER
VANMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKELLKQIVRIYVHLARGDAKNIFPSAIS
SDGRSYNEQLFSAAADVLRRIGEDGRIIQDFIELGAKAKAAASEAMDTEAALGDIPDEFL
DPIQYTLMKDPVILPSSRITIDRPVIQRHLLSDSTDPFNRSHLTSEMLIPNTELKARIEE
FIRSQELKKHGEGLNMQSSKGTIQPTSGEMLID
NT seq 3162 nt   +upstreamnt  +downstreamnt
atggctacgcaaaaaccccaaagagccccagaagaaatagaagatatgatcctaaggaag
atcttccttgtaacccttaaagagaacccagagaacccatcatcatcttcttctgatcca
agggttgtttacctagagatgaccgcagctgagatcttaagtgaaggcaaaagtctttta
ctttcacgtgatctaatggaaagggttttaattgatcgtctgtctggtgaattccctaat
tcagaacccccttttaattatctcattggttgttataagcgagctcatgaagaaatcaag
aagatttccaacatgaaagacaagacgctgcgttctgggatggaatctgctgctaaacag
gctaagaagttggctgtttcatatgctaggattcatctgggaaatcctgatttgttttct
aatgggaatttaaaagatagtaaccccaaagccggttcttctttgtcttccagttcccct
ttgtttcccttagtttttgctgaagtttcaagtggagtaatgcttgatgggtttggaggg
aatgattttggaagtcgggtggattgtccacctgggtttttggaagacttctttaaggat
tcagattttgatactttggaccctatcttaaaaggtttgtatgaggatttaagagggagt
gttttgaaagtttcagctttgggaaattttcagcaacctttgagggctttgttgtatttg
gttaagttccctgttggtgctaaaagcttggttaatcatccatggtggattcctaaagga
gtttacttgaatggacgtgtcatcgaaatgactagcattttgggcccctttttccatgtt
agtgctctgcctgatcataccattttcaagagccagcctgatgttggccagcagtgcttc
tcagatgcatcaactagacgagcagctgacttgttatcttcattcaccacaataaagact
ctcatgaatactttatatgatggtctggctgaagttcttctttgtctccttaaaaacact
gagactcgtgacagtgtcctcgagtatcttgcagaagtcatcaataaaaatgcatcaagg
gcccatatacaggtggatcctatatcttgtgcaagttctggcatgtttgtcaatctcagt
gctgttatgctccgactttcagagccatttttggatgcaaatttaacaaaaagagataaa
atcgatccaacctatgtcttctactgtagccgtttggatttgagggggttaactgctctg
cacgcaacatcagaagaagtggctgaatggatcgataaagataatcctgtgaaaactgac
gggagtggactaaataatgatggtgaaaatagtttgcggcaattgcaagaagcatctagt
tcgggaagtaccccaaatgtgaagccaacccgaagtagtagtgaaaaagctaaatatcct
ttcatttgtgaatgcttctttatgactgctagggtactcaacttgggcctcctaaaggca
ttttcggactttaagcatctagtccaggacatttcaagaagtgaagacacacttgccacc
ttaaaagccatgcaaggacaggcaccttctccacaactggagcttgatatatcgaggctt
gagaaggaaattgaattgtattcacaggaaaaattctgttacgaggctcaaattttgagg
gatggggcacttattcaacaagcactttcgttctatcgactaatggtggtttggttagtt
ggcttggttggtggatttaaaatgcctctgccacctacatgtccgatggaatttgcttcg
atgccagagcactttgtggaagatgctatggaactattaatatttgcttctcggattccg
aaagctcttgatggagttcattcatatgtactggatgattttatgaaatttattattatg
tttatggcaagtccgcaatttatcaagaacccctatctcagagcaaaaatggttgaagtt
ttgaactgttggatgccgcgtagaagtggttcatctgcgacatcgacactatttgaagtg
catcaactgtctttggaatatctcgtgcggaatcttttgaagctatatgttgacattgaa
ttcacaggttctcacacacagttctatgataagttcaacatccgccataatattgctgaa
cttcttgaatatctttggcaagttcctagtcactgtaatgcttggaaacagattgcgaag
gaagaagaaaagggtgtttatctgaatttcttgaatttcctgattaacgatagcatctac
ctcctcgatgaaagtcttaacaaaattcttgaactcaaagagcttgaggctgagatgtca
aatactgcagaatgggaacgcaggcccgctcaggagaggcaagagagaactcgactgttc
cactcccaggagaatattatacggattgacatgaagttggcaaatgaggatgttagtatg
ctggcttttacatctgagcagattacagctccttttctactccctgagatggttgagaga
gtggcgaatatgttaaattactttttattgcaattagttggccctcaaagaaagtcactc
actctgaaagatcccgaaaagtatgaattccgtccgaaagagttgctcaagcagattgtc
cgcatttacgttcatctggcaaggggtgatgccaaaaacatatttccatctgccatctcc
agtgatggtcgatcctataatgaacagttgtttagtgctgcagctgatgttcttcgaaga
attggtgaggatgggaggataatacaagattttatcgagcttggtgcaaaggccaaggct
gcggcttcagaggccatggacactgaagctgcccttggagatattcccgacgaattcctc
gatccaattcaatatacattgatgaaggatccggtgatcttaccatcttcaagaatcaca
atagacagacctgttatccaaagacatcttctaagtgatagtactgatccattcaaccga
tctcatcttacctcggagatgttgattccgaacaccgaactgaaggcaagaattgaagag
tttattaggtcccaggagctgaagaagcatggagaaggcttgaacatgcaaagctctaaa
ggaacaatacaaccaacaagtggagaaatgttaattgattag

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