Gossypium hirsutum (upland cotton): 121223482
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Entry
121223482 CDS
T04793
Name
(RefSeq) tubulin alpha-5 chain-like
KO
K07374
tubulin alpha
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04145
Phagosome
ghi04517
IgSF CAM signaling
ghi04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
121223482
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
121223482
09142 Cell motility
04814 Motor proteins
121223482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
121223482
03036 Chromosome and associated proteins [BR:
ghi03036
]
121223482
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
121223482
04147 Exosome [BR:
ghi04147
]
121223482
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
121223482
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
121223482
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
121223482
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
121223482
Exosomal proteins of other body fluids (saliva and urine)
121223482
Exosomal proteins of colorectal cancer cells
121223482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
121223482
NCBI-ProteinID:
XP_040960941
UniProt:
A0ABM3B1M5
LinkDB
All DBs
Position
D11:68332796..68336437
Genome browser
AA seq
450 aa
AA seq
DB search
MREVISVHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSEGNAGGNHDAFSTFFSETGSGK
YVPRALFIDLEPTVMDEVRAGTYRQLFHPQQLISGKEDAANNFARGHYTAGRDIVEVCLD
RVRKLADNCTGLQGFLMFNAVGGGTGSGLGSLLLERLSVEYGKKPKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYKNLNRLISQIISSLTS
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISVAKAYHENLSVAQITSGVFEPGS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVRNIKTRRAVQFVDWCPTGFKCGINYQPP
TVVPGGDLAEVRRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYIGEGMEEGEFSE
AREDLSALEKDYEEVGAEGPEDDEEPQEDY
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggtgattagtgttcatataggacaagctggaattcaggttgggaattcatgt
tgggagctttactgccttgaacatggcattcagcctgatgggatgatgcctagcgagggc
aatgcaggtggtaaccatgatgccttcagcaccttctttagcgagactggatccggaaaa
tacgtgccgagagctttattcatcgacctagagccgaccgtcatggacgaagttcgggcc
gggacttaccggcaactgttccatccgcaacaacttatttccggcaaggaagatgctgct
aataactttgctagaggacactacacagctggtagggacattgtggaagtttgccttgac
cgagttagaaaactggctgataactgcactggattgcaagggtttttgatgtttaatgcc
gtgggcggtggaactggttccggtttaggctcgctgcttttggagcgcttgtccgttgaa
tatgggaaaaagcctaaacttggcttcacaatctatccttctcctcaggtttctacagca
gttgttgaaccatacaatagtgttctctcaactcattctctccttgaacacacagatgtt
gtggtgcttctcgacaacgaagctatatacgatatctgcaggcgatcgttagacattgaa
aggccgacttacaagaacttgaaccgcttaatatcacaaatcatttcgtctttgacgtct
tcgttgaggtttgatggtgccataaacgttgacattactgagtttcagacgaaccttgtg
ccatatcctcgtatccatttcatgctctcctcgtatgccccggtgatctcggttgcaaag
gcttaccacgaaaacctatcagttgcccagattaccagtggtgtttttgaaccgggaagc
atgatggctaaatgtgatccgaggcacggaaaatacatggcgtgctgtttgatgtaccgt
ggagatgtcgtaccaaaggacgtaaatgctgctgttcgcaacattaaaactaggcgggcg
gttcagtttgtagactggtgccctactggtttcaagtgtggcatcaactatcagccacca
acggtggtacccgggggtgatctcgctgaggtaagacgtgcggtgtgtatgatcagcaat
aacacagcggtggcagaggttttcgcccgaattgatcataagtttgatctcatgtatgca
aagagagctttcgttcattggtacataggtgaaggaatggaggaaggtgaattctctgaa
gcacgcgaagatctctccgctctcgagaaagattatgaagaagtcggagcagaaggtccc
gaagatgatgaagaaccacaggaagattactag
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