KEGG   Gossypium hirsutum (upland cotton): 121223482
Entry
121223482         CDS       T04793                                 
Name
(RefSeq) tubulin alpha-5 chain-like
  KO
K07374  tubulin alpha
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04145  Phagosome
ghi04517  IgSF CAM signaling
ghi04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    121223482
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    121223482
  09142 Cell motility
   04814 Motor proteins
    121223482
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    121223482
   03036 Chromosome and associated proteins [BR:ghi03036]
    121223482
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:ghi04812]
    121223482
   04147 Exosome [BR:ghi04147]
    121223482
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     121223482
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     121223482
Cytoskeleton proteins [BR:ghi04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    121223482
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   121223482
  Exosomal proteins of other body fluids (saliva and urine)
   121223482
  Exosomal proteins of colorectal cancer cells
   121223482
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 121223482
NCBI-ProteinID: XP_040960941
UniProt: A0ABM3B1M5
LinkDB
Position
D11:68332796..68336437
AA seq 450 aa
MREVISVHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSEGNAGGNHDAFSTFFSETGSGK
YVPRALFIDLEPTVMDEVRAGTYRQLFHPQQLISGKEDAANNFARGHYTAGRDIVEVCLD
RVRKLADNCTGLQGFLMFNAVGGGTGSGLGSLLLERLSVEYGKKPKLGFTIYPSPQVSTA
VVEPYNSVLSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYKNLNRLISQIISSLTS
SLRFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISVAKAYHENLSVAQITSGVFEPGS
MMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVRNIKTRRAVQFVDWCPTGFKCGINYQPP
TVVPGGDLAEVRRAVCMISNNTAVAEVFARIDHKFDLMYAKRAFVHWYIGEGMEEGEFSE
AREDLSALEKDYEEVGAEGPEDDEEPQEDY
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgagggaggtgattagtgttcatataggacaagctggaattcaggttgggaattcatgt
tgggagctttactgccttgaacatggcattcagcctgatgggatgatgcctagcgagggc
aatgcaggtggtaaccatgatgccttcagcaccttctttagcgagactggatccggaaaa
tacgtgccgagagctttattcatcgacctagagccgaccgtcatggacgaagttcgggcc
gggacttaccggcaactgttccatccgcaacaacttatttccggcaaggaagatgctgct
aataactttgctagaggacactacacagctggtagggacattgtggaagtttgccttgac
cgagttagaaaactggctgataactgcactggattgcaagggtttttgatgtttaatgcc
gtgggcggtggaactggttccggtttaggctcgctgcttttggagcgcttgtccgttgaa
tatgggaaaaagcctaaacttggcttcacaatctatccttctcctcaggtttctacagca
gttgttgaaccatacaatagtgttctctcaactcattctctccttgaacacacagatgtt
gtggtgcttctcgacaacgaagctatatacgatatctgcaggcgatcgttagacattgaa
aggccgacttacaagaacttgaaccgcttaatatcacaaatcatttcgtctttgacgtct
tcgttgaggtttgatggtgccataaacgttgacattactgagtttcagacgaaccttgtg
ccatatcctcgtatccatttcatgctctcctcgtatgccccggtgatctcggttgcaaag
gcttaccacgaaaacctatcagttgcccagattaccagtggtgtttttgaaccgggaagc
atgatggctaaatgtgatccgaggcacggaaaatacatggcgtgctgtttgatgtaccgt
ggagatgtcgtaccaaaggacgtaaatgctgctgttcgcaacattaaaactaggcgggcg
gttcagtttgtagactggtgccctactggtttcaagtgtggcatcaactatcagccacca
acggtggtacccgggggtgatctcgctgaggtaagacgtgcggtgtgtatgatcagcaat
aacacagcggtggcagaggttttcgcccgaattgatcataagtttgatctcatgtatgca
aagagagctttcgttcattggtacataggtgaaggaatggaggaaggtgaattctctgaa
gcacgcgaagatctctccgctctcgagaaagattatgaagaagtcggagcagaaggtccc
gaagatgatgaagaaccacaggaagattactag

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