Gordonia iterans: C6V83_14985
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Entry
C6V83_14985 CDS
T05370
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
git
Gordonia iterans
Pathway
git03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
git00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C6V83_14985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
git03000
]
C6V83_14985
03400 DNA repair and recombination proteins [BR:
git03400
]
C6V83_14985
Enzymes [BR:
git01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
C6V83_14985
Transcription factors [BR:
git03000
]
Prokaryotic type
Helix-turn-helix
AraC family
C6V83_14985
DNA repair and recombination proteins [BR:
git03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
C6V83_14985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
DUF7437
HHH
Motif
Other DBs
NCBI-ProteinID:
AVM01352
UniProt:
A0A2S0KI37
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All DBs
Position
3253113..3254648
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AA seq
511 aa
AA seq
DB search
MTTPATLQLLDTGDFDLRYRALAARDARFDGQFFATVHSTGIYCRPSCPARTPKPQNVDF
VPTAAAAVARGFRACRRCLPDAAPGSPRWNTGADLASRAMRLIADGLVDRSGVDGLAAAL
GYTPRHLSRVLRAELGAGPLALARAHRTTTARMLLTGTTLPVSDVAFAAGFSSIRQFNDT
VREIFGMSPTELRTRYSGAAATSGPLTLRLPFRAPYDVEWTRFGLASHAVPGLEHWDGHT
FHRTMNLPHGPALAALRLPDSPDAASATGHASVRFEHLDLRDLTVAVNRLRRLTDLDADP
HAVDAALSADPRLAPLISSAPGIRIPGSVDPFETLVRTMAGQQISIAAARTRLGALVADL
GEAVPWHSPDRPELPSRLFPTPEALAAEGARAFRGPTRLARAVAGASGAIAAGTMEPNPG
SAASKLRTELLALDGIGPWTADQVVMRVTGDPDVLPHGDLVLTRAAAGLGVDPSATQGWR
PWRSYAAMHLWRHRLLSASDAATPREVRNQP
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgcccgcgaccctccagctcctcgacaccggggacttcgatctccggtatcgg
gccctggccgcccgtgatgccaggttcgacggccagttcttcgccacggtccactccacc
gggatctactgccgcccgtcgtgcccggcccgaacgccgaagccgcagaacgtcgacttc
gtcccgaccgccgcggcggccgtcgcccgcggattccgcgcctgccgtcgctgtctgccc
gatgcggcgcccgggtcgccacgctggaacaccggcgccgacctggccagtcgggcgatg
cgcctgatcgccgacgggctggtcgatcgttcaggcgtcgacggactcgctgccgccctc
ggctacacgccacgccacctgagccgggtgctgcgcgccgaactgggtgccggtccgctc
gccctggcccgagcgcaccggacgacgacggcgcggatgctgctgaccggaacgacgctc
ccggtctccgacgtcgccttcgccgccggattctccagcatccggcagttcaacgacact
gtacgcgagattttcgggatgtcgccgaccgagctgcgcacccgctactccggcgccgcc
gcaacctccggaccgctgacgctgcggcttccgttccgtgcaccgtacgacgtcgagtgg
acccgcttcggattggcgtcgcacgccgtacccggccttgagcattgggacggacacacc
ttccaccgcacgatgaatcttccacacggtccggcactggccgcactgcggttgcccgac
tccccggacgccgcaagtgcgacgggacacgcgtcggtgcgcttcgagcacctcgatctg
cgcgacctgaccgtggccgtgaaccgcttgcgccggctcaccgacctggacgccgacccg
cacgcggtcgacgcggcgttgtctgccgacccgcgattggctccgctcatctcgtccgcg
cccggcatccggatccccggcagcgtcgaccccttcgagacgctcgtccggaccatggcc
ggccagcagatcagcatcgccgccgctcgaacccgcctcggcgccctggtcgccgacctc
ggcgaggcagttccgtggcacagcccagaccggccggagctcccctctcgcctgttcccg
acgccggaggccctcgccgccgagggtgcccgcgcgttccggggcccgacccggctggcc
cgggccgtcgccggggcctccggtgcgatcgccgccggaacgatggaaccgaacccgggg
tctgccgcgtctaagttacggacggagcttctcgctctggacgggatcggaccgtggacc
gccgatcaggtggtcatgcgcgtcaccggtgatccagacgtgctgccgcacggtgatctg
gtgctcaccagagccgccgccggtcttggcgtagacccgtccgcgacgcaggggtggcga
ccgtggcgctcgtacgcggcgatgcacctgtggcgacatcgcctcctgtccgcgtcggac
gcggccacaccgagagaagtgaggaaccagccatga
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