Gekko japonicus (Schlegel's Japanese gecko): 107105947
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Entry
107105947 CDS
T04299
Symbol
CRNKL1
Name
(RefSeq) crooked neck pre-mRNA splicing factor 1
KO
K12869
crooked neck
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107105947 (CRNKL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107105947 (CRNKL1)
03036 Chromosome and associated proteins [BR:
gja03036
]
107105947 (CRNKL1)
Spliceosome [BR:
gja03041
]
Complex B
Other components
Prp19-related factors
107105947 (CRNKL1)
Complex C
107105947 (CRNKL1)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
107105947 (CRNKL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
HAT_Syf1_CNRKL1_N
HAT
TPR_14
Suf
TPR_16
TPR_19
TPR_CcmH_CycH
NRDE-2
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
107105947
NCBI-ProteinID:
XP_015261487
UniProt:
A0ABM1JJ50
LinkDB
All DBs
Position
Un
AA seq
685 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPQQKITDEEELND
YKLRKRKTFEDNIRKNRTVISNWIKYAQWEESLKEVQRSRSIYERALDVDYRNVTLWLKY
AEMEMKNRQVNHARNIWDRAITTLPRVNQFWYKYTYMEEMLGNVAGARQVFERWMEWQPE
EQSWHSYINFELRYKEVDRARTIYERFVIVHPDVKNWIKYARFEEKHGYFAHARKVFERA
VEFFGEDHMDEHLYVAFAKFEENQKEFERVRVIYKYALDRIPKHEAQELFKNYTIFEKKF
GDRRGIEDIIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADPDAVREVYERAIANVP
PIQEKRHWKRYIYLWINYALYEELEAKDPERTRQVYQACIELIPHKKFTFAKMWLLYAQF
EIRQKNLQLARRALGASVGKCPKNKLFKGYIELELQLREFDRCRKLYEKFLEFAPENCTS
WIKFAELETILGDVDRARAIYELAIGQPRLDMPEVLWKSYIDFEIEQEEYENTRNLYRRL
LQRTQHVKVWISFAQFELSAGKDDSLSRCRQIYEEANKTMRNCEEKEERLMLLESWRNFE
EEFGTESSKERVDKLMPEKVKKRRKLQAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KLWKKQQQDDDPERDPDKDVDESSP
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctacggcggccgggaagcagcgaatccccaaagtggcgaaggtgaagaacaaa
gcacccgcagaggtccagatcacagcggagcagctcttaagggaagccaaggaaagggag
cttgagcttcttcccccgcctcctcagcagaagatcacagatgaagaagagctgaatgat
tacaaacttcggaaaagaaaaacttttgaagataatatacggaaaaatcggactgttatc
agtaactggatcaagtacgcacaatgggaggaaagcctcaaagaagtacaaaggtctcgt
tccatttacgagcgtgctctagatgtggactaccgaaatgtcaccctttggctgaagtac
gcggagatggaaatgaagaaccgtcaggtgaaccatgcccgaaatatttgggatcgcgct
atcactaccctaccaagggtcaaccagttctggtacaaatatacttacatggaagagatg
ctgggaaacgtcgcgggagcccgccaggtgttcgagcggtggatggaatggcagcccgag
gaacagtcgtggcattcctacatcaacttcgagctgcgatacaaggaggtggacagagcg
cgcaccatttatgagagattcgtaattgtgcatcctgatgttaagaactggatcaagtat
gcccgttttgaagaaaagcacggttattttgcccatgcaaggaaagtctttgagagagcc
gtggagttttttggagaagaccatatggacgaacatctatatgtagcttttgccaaattt
gaagagaaccagaaagagttcgaaagggtgagggtgatctacaaatacgccttggaccga
atcccgaagcacgaggcccaggagctgttcaaaaattacaccatctttgaaaagaaattt
ggggaccggaggggcatcgaggacataattgtcagcaagaggagattccagtatgaggag
gaggtgaaggccaatccacataactacgacgcctggttcgattacttgcggctcgtggaa
agcgacgccgatcccgatgccgtacgtgaagtctacgaaagagccattgccaacgttcct
ccgatccaagaaaagagacactggaagaggtatatctacctgtggatcaactacgcgctg
tatgaagagctagaggcgaaggatccagagcggacgaggcaagtgtaccaagcctgcatc
gaactcattcctcacaaaaagtttacatttgccaaaatgtggctgctgtatgctcagttt
gaaataaggcagaagaatctccagcttgccaggagagcattgggagcctctgtgggcaaa
tgtccaaagaacaagctcttcaaaggctacatcgagctggagctgcagctgcgggagttt
gaccggtgccggaagctctacgagaagtttctggagtttgccccggaaaactgcacctcc
tggatcaagtttgccgagctggaaaccatcctgggagacgtggacagagccagagccatc
tacgaactggccatcggccagccaagactggacatgccggaggttctctggaagtcttac
atcgactttgagattgaacaggaggagtacgagaacacgagaaatctttaccggcgattg
cttcagaggacgcagcatgtcaaggtgtggatcagttttgctcagttcgagctctcagca
gggaaagacgatagtttgtcacggtgcaggcagatctacgaagaggccaataagaccatg
cgaaactgcgaggagaaagaggagaggcttatgcttctggaatcctggaggaactttgaa
gaggagtttgggacagaatccagcaaagagcgggtggataaactcatgccagagaaagtc
aagaagcggaggaagcttcaggccgaagatgggtctgatgccggctgggaagaatattac
gattacattttcccggaggatgctgccaatcagcccaacctcaaactgctcgcgatggca
aaactctggaaaaagcagcaacaagacgatgacccagagagagatccggacaaggacgtc
gatgaaagcagtccctaa
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