Gekko japonicus (Schlegel's Japanese gecko): 107114009
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Entry
107114009 CDS
T04299
Symbol
COL4A5
Name
(RefSeq) collagen type IV alpha 5 chain
KO
K06237
collagen type IV alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04382
Cornified envelope formation
gja04510
Focal adhesion
gja04512
ECM-receptor interaction
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107114009 (COL4A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107114009 (COL4A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107114009 (COL4A5)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107114009 (COL4A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gja04147
]
107114009 (COL4A5)
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107114009 (COL4A5)
Exosome [BR:
gja04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107114009 (COL4A5)
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107114009 (COL4A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107114009
NCBI-ProteinID:
XP_015270913
LinkDB
All DBs
Position
Un
AA seq
1575 aa
AA seq
DB search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NT seq
4728 nt
NT seq
+upstream
nt +downstream
nt
ggtgaaagggggtttccaggtttggcaggtcagccaggtttacctggatttccaggacca
gaagggccacctggaccaagaggtgaaaaaggagacgacggacttccagggccatttgga
cctaaaggagttagagggcttccaggtttgccaggatttccaggaacgccaggagtccct
gggctaccaggtcaggatgggcctccaggaactccaggtatcccaggatgcaatggaaca
aagggagaacatggctaccctggcagtccgggtttcccaggtttacaaggccccccaggt
tctcctggcataccaggtatgaagggtgaccctggggaaataatcacgtctccgttgcca
ggacaaaaaggcgacccaggatttccgggtcttccaggaataccaggccctgccggcccc
atcggagtgcaaggtccccttggtcctcctgggccaccgggtttgatgggtcttcctggc
cccccgggatttccaggcccaaagggcaatatgggcttgaacttccaggggcccaaagga
gaaaagggtgaacaggggctacaaggacccccggggccaccaggacagatcggtgaacag
aaaagaccaaacgacgtggagtttcagaagggagatccgggtgttccaggtgaccgtggt
ccaccaggcccccctgggccacaaggtcctcctggctttccaggtggtggaaaaggtgaa
aaaggtgagcaaggagaaccaggcaaaagagggaagcctggcaaagacggagagcccggg
ccgactggtttgactggtttgcctggcgatcctggtatacccggcctttcaggaagagat
ggagaaaaaggtcagaaaggtgaaactggtccagttggcccacctgggcttgtgattcca
aggccaggagtcagtacaacagtgggacccaaaggaagcaaagggctgccaggtcaacgt
ggcgagaaaggtgaccgtggttttcctggcttacagggccctcctggcatacagggcccc
ccaggaatccccagtgtaggcccttctggagcccctggcctacctggggagagaggacag
aagggggatcaaggtctacctggggtttccattcctggaccgcctgggcttgatggacga
cccggagcccccggcccaccaggccctcctggccaacctggaccttctgttccacccact
ggccagctgtgtgaccgaggcccccctggccttccaggacctccaggagagcaagggttt
ctgggggagagaggccagaaaggtgataaaggagacacctgctttaactgcataggcact
ggcattaaaaaaaccccagggccgaaggggttcccagggccgcctggaagtccagggtca
cttggtttgcctggccccaaaggtgataaaggctttcctggtctacttggtcctcctggc
ccaccaggttttcctggccctccaggccttgctggacgtcctggtgcaaaaggtgacccc
ggcgaagtccttggcttccctggcttgaaaggcgacaagggagaccctggtttcccagga
cttccgggtctgcctggactcgctggttctcctggatcagatggacagccaggccctcct
ggaccaaagggcgaaccaggcagcgtggctttcaagggggaaagggggccccccggggac
cctgggttgccggggcttcctggagaccgagggccagtggggcctcctggatttggtcca
ccggggccttctggtgaaaagggcattcaaggtgtttctgggcggccaggacaccctgga
gtgccaggaccaaaaggcgaacctggtcaaaccattacagaagcagggttgccaggcatc
cctggtcccccaggcagagatggcgaacctggacttccaggtgatcccggacatccaggc
caacctggattcccaggggccccaggtgcaaagggagatccaggtttacccggcattggt
cttccgggcccaccggggcctaaaggtttcgctgggttgccaggtctccctggatcgcca
ggagcctccggaagacccggtcaagatgggccgcctgggccgcctggaattccaggaccg
aagggagaccgtggatttggtgtgccaggacccgttgggccaccggggtctccaggtttc
aaaggtgtacagggccctaaaggtgatcctggatttccgggaagtcctggtattccagga
cgtggaggttttgatggaatcccagggtctaaaggtgatgcgggagcaccaggccagcct
gggttagtaggacttccaggggttccaggatctggggtccaaggcccacctggaccacca
gggcctccaggaactgcgggaccaccaggtccaccagggttgcatggcatacgaggtgag
aagggggatcctgggccaccagggttcgacattcctggtcctccaggtgacaaaggcaac
caagggtttccagggccacctggtttccaagggcccccgggtctaccagggccacccgga
cgagatggaacccccggatttccaggtgctaaaggtgagatgggcgtgatgggaactccg
ggtccccaagggtctcctggagcccctggcagaggtggtcttcctggcccaaaaggcgat
gctggcatctcaggccagccgggccttccaggatcttcggggctaaaaggcagcaaaggt
gagatgggcctgcccggcgctccaggaatacttgatccaagccaagtgatcacgaaaggc
cagaaaggagaaccaggagtgccaggtgggcctggaataacaggccagaagggtcacgaa
ggcgtcccaggtgaatcaggacttcctggactaaatgggcaaccaggcgcacctggattg
ccagggcccaagggagacatgggatttcctggcccacctgggccaactgggccccctgga
caaaaaggcaccggtggtgaaatgggcttcccaggtcctccaggaccaaaaggtctgcaa
ggcataccagggcgtcccggccagccaggttctcctggattttctgggccaaagggagag
aagggtgaatcaggccgttccgaaattggaattccaggcccgcctggccctaagggtgat
agtggtttgcctggatactcaggtagcccaggcagtaaagggtcacctggcaatcctggg
ctgcctggtttgcctggtaatccaggtgcaaaaggcgatcgtggcctccccgggttccca
ggccagccaggttttgggcgacccggaccgccgggactaccgggattatcaggtcaaaag
ggtgatgtgggcttccctggaccctcagggcccccaggaacccctggtctgaagggagag
atgggtgtccagggatttcctggccttcaaggtcctccggggcctccaggactgcccggg
ccaactacagaaggtctcaaaggaagccgtgggcagccaggcataccaggaaggccaggt
ctgcctggtccagaaggtccccgaggacccccaggaactggacaagtgaaaggagaaaag
ggcaacccagggataccaggtcagcctggaccggttggcttaaaaggagatcaaggacta
cctgggcgcccgggtgagcccggccatccaggtctgaacggaatgaaaggcgatctcggc
gttccgggagtcccgggattaccaggtatgaagggcccctctggacctctaggcccggct
ggcctctcaggggatcctggagctcccggatctccaggccctccgggaatacccggccca
gctggtgaaacgatcgtaataaaaggcgaccagggtccaccgggtctcccagggcagccg
ggactcaaaggtctccctgggctcccgggcccaccaggactgacaggnnnnnnnnnnnnn
nnnnnnnntcttggattcgacggtcccccagggcgtaaaggggagagaggccttccgggt
cagccaggtttgcatggctcacagggtcttcctggcccagatggattgcaaggcccacct
ggtccacctggaactggttcggtcgctcatggattccttataactcgccacagccagacg
acaggcgcacctctttgtcctcaaggaacagtcaggatctacgatggattttctctcctc
tatgtgcagggaaacgagagagctcatgggcaggacttaggcactgccggtagctgtctc
cgccgtttcagcacgatgcccttcatgttttgtaacatcaacaacgtctgcaattttgcg
tcaagaaatgactattcctactggctgtccacccctgcgccaatgcctatgagcatggag
cccttaactggaagggacatccagccctttattagtcggtgcgcagtttgtgaagctccc
gctgtggtgatagcagtccacagtcagaccattcaaatcccaccgtgtccgcagggctgg
gcctccctgtggattggttattctttcatgatgcacaccagtgccggagcagagggatct
ggacaagcgctggcctccccgggttcctgcctagaagagttccgctcggctcctttcatt
gagtgccacggtcgagggacctgcaattattacgccaattcgtacagcttctggctggca
actgtggaagtggcagaaatgtttagtaaacctcagtcggaaacactgaaggccggcgac
ctgaggacgcgtattagccgatgccaagtctgtatgaagaggacgtaa
DBGET
integrated database retrieval system
