Gekko japonicus (Schlegel's Japanese gecko): 107118551
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Entry
107118551 CDS
T04299
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107118551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107118551
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107118551
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107118551
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not1
NOT1_connector
ARM_Cnot1
DUF3819
CNOT1_CAF1_bind
Motif
Other DBs
NCBI-GeneID:
107118551
NCBI-ProteinID:
XP_015276399
UniProt:
A0ABM1KRR2
LinkDB
All DBs
Position
Un
AA seq
1163 aa
AA seq
DB search
DLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSVRSVVFRPPNPWTMAIMNVLAELHQEH
DLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKDVKQPEELPPIT
TTTASTTPATSTTCTATVPPQPQYSYHDINVYSLGGLAPHITLNPTIPLFQAHPQLKQCV
RQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAAHHMMRNLTAGMA
MITCREPLLMSIATNLKNSFATALRAASPQQREMMEQAAAQLAQDNCELACCFIQKMAVE
KAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGVDPKQLAVYE
EFARNVPGFLPTNDLTQPTGILAQPMKQAWATDDVAQIYDKCMTELEQHLQSVPHTLPMN
PQTQALRSLLEAVVVARNSRDAIAALGLLQKAVEGLLDATSGADADLLLRYRECHLLVLK
ALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVSMQQYDLHLAQSMENG
LNYMAVAFAMQLVKILLVDERSVAHITEADLFHTIETLMRINAHSRGNAPEGLPQLMEVV
RSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYHSAAAGRDST
KAFSAFVGQMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQQHNPAANPTMIRAKCY
HNLDAFVRLIALLVKHSGEAANTVTKINLLNKVLGIVVGVLLQDHDVRQSEFQQLPYHRI
FIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYAWLELISHRIFIARMLA
HTPQQKGWPMYAQLLIDLFKYLAPFLRNVELAKPMQILYKGTLRVLLVLLHDFPEFLCDY
HYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSEINIAPRILTNFTGVMP
PQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNIQLINALVLYVGTQAIAHIHNK
GSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFA
EANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKFWNHEFVHCAPEIEKLF
QSVAQCCMGQKQAQQVMEGTGAS
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
gacttggatgtgaaatcgttgctgctggaggcttatgttaaggggcagcaggagctgctg
tatgttgtgccatttgttgccaaagtcttggaatcgagtgtaagaagcgtggttttcagg
cctcccaacccgtggaccatggcgatcatgaatgtacttgcagagttgcaccaggagcat
gatttaaaactgaacctgaagtttgagatcgaagtactctgcaagaaccttgcccttgac
atcaatgagctgaagcctgggaacctcctgaaagacaaggatcgactgaaaaatctggat
gaacagctgtctgctccaaagaaggatgtgaaacaaccagaagagttgccacccattacg
accaccactgcttccacaacacccgctaccagcaccacgtgcacagctactgttcctcca
cagccccagtacagctaccacgatatcaacgtctactctctgggagggctggctccacat
attactcttaatccaactatccccttgtttcaagcacacccacagttaaagcagtgcgtg
cgccaggccatcgagcgtgcagttcaagaacttgtgcatccagtggtggaccggtccatt
aaaatagccatgactacctgtgagcagattgtaaggaaggattttgcgttagactcagag
gagtcacgcatgcgcatcgcagcacaccacatgatgcgaaatttgaccgctggcatggct
atgatcacctgccgggaaccattgctgatgagcatagctaccaacctgaagaacagcttt
gccactgcattgagggccgcttcgccgcagcagagggagatgatggagcaggctgctgcc
cagctggctcaggataactgcgagctggcatgctgcttcattcagaagatggctgtcgag
aaggcaggccctgaaatggacaagcggctggccactgaatttgagttgagaaaacacgcc
agacaagaaggtcgtagatactgtgatcctgtagtactgacttaccaggctgagcggatg
ccggaacagattaggttaaaggttggtggtgtggacccaaagcagctagctgtttatgaa
gaatttgcacgcaatgtccctggtttcttaccaaccaatgacttaactcagcctacagga
atcctggcgcagccgatgaagcaagcctgggcaacagacgacgtagcacagatctatgat
aaatgcatgacagaactggaacagcacctgcagtccgtccctcacaccctgcccatgaac
ccgcaaacccaagccttacgaagcctcttggaggcggtggttgtggctcgtaactctcgt
gatgctattgcagctcttggactgctccagaaggcggtcgagggcctgctggatgctact
agtggtgcggatgctgatcttcttctccgctatcgagagtgtcacttgcttgttttgaaa
gccttgcaggatggccgtgcttatggctctccgtggtgtaataagcagatcacaagatgc
ctgattgaatgtagagatgaatataaatacaatgtagaggcggtagagctgctgatacgt
aaccacctagttagcatgcagcagtacgatcttcacttggctcagtcgatggagaatggc
ctgaactatatggctgtggcatttgcaatgcagttggtaaaaatcctcttggtggatgag
agaagtgtagctcacataacggaagcagatctgttccacaccattgaaactctgatgagg
attaatgctcactcccgaggaaatgcaccagaagggttaccgcagctgatggaagtggta
cgctccaactatgaagccatgattgaccgtgctcacggagggccaaactttatgatgcat
tctggaatctctcaagcttctgagtatgatgatccccctggcctgagggagaaggcagaa
tacctgctgagggaatgggtcaatctctaccactctgcggcagctggtcgtgacagtacc
aaagcattctctgcgtttgttggacagatgcatcagcaaggaatcctgaagaccgacgac
ttgatcacacggttctttcgcctttgcacagaaatgtgtgtggaaatcagctaccgtgct
caagcagagcagcagcacaaccctgctgcaaatcccaccatgattcgtgccaagtgttac
cacaatttggatgcctttgtgcgccttattgcactgctggtgaagcattctggggaggct
gccaacactgttaccaagatcaatttgctcaacaaggttcttggaatagtggtgggtgtc
ctattgcaggatcatgatgttcgtcagagtgaatttcagcagctcccctaccaccgcatt
ttcatcatgctgctgttggaattaaatgcccctgaacatgtcctggaaacaattaatttt
cagactctcacagcattctgtaacacatttcacatcctgagacccacaaaagctccaggt
tttgtttatgcctggttagaattgatctcccaccggatatttattgcaagaatgctggca
catacaccacagcagaagggctggccaatgtatgcccaactgctgatcgacctatttaaa
tacttggcacctttcctgaggaatgtggagcttgccaaacctatgcaaattctctacaag
ggtaccttgcgtgtgctgctggtcttattacatgattttccagaattcctctgtgactac
cactatgggttctgtgatgtgattcctccaaactgcattcagctaaggaatctgatcttg
agtgccttcccacgaaatatgaggcttccggatcccttcactcctaaccttaaggtggac
atgttgagtgagattaacattgctcctcggatcctcaccaacttcacaggagtaatgcca
cctcagttcaagaaggatttggattcgtatctcaaaacgcgctctccggtcacattcttg
tccgaccttcgtagcaatttgcaggtgtcaaacgagcctggcaatcgttacaatatccag
ttaataaatgccctggtgctgtatgtgggcacccaggccattgcgcacattcacaacaaa
ggaagcactccctccatgagcaccatcacccactcagctcatatggacatcttccagaat
ctggctgtagatctggacacagaaggtcggtacctcttcttgaatgcaattgccaatcag
ttacggtaccccaacagtcatacacactatttcagctgtaccatgctttacttatttgcg
gaagccaacactgaagctattcaagaacagatcaccagagttctcctagagcgactgatt
gtaaataggcctcacccatggggtctgctaattacctttattgagctgattaaaaaccca
gcatttaaattctggaaccatgagtttgttcattgtgctccagaaattgaaaagctgttc
cagtccgtggcacagtgctgcatggggcaaaagcaggcacagcaagtgatggaagggacc
ggtgctagttaa
DBGET
integrated database retrieval system
