Gekko japonicus (Schlegel's Japanese gecko): 107120736
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Entry
107120736 CDS
T04299
Symbol
COL6A1
Name
(RefSeq) collagen type VI alpha 1 chain
KO
K06238
collagen type VI alpha
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja04510
Focal adhesion
gja04512
ECM-receptor interaction
gja04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107120736 (COL6A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107120736 (COL6A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
107120736 (COL6A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gja04147
]
107120736 (COL6A1)
00536 Glycosaminoglycan binding proteins [BR:
gja00536
]
107120736 (COL6A1)
Exosome [BR:
gja04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107120736 (COL6A1)
Glycosaminoglycan binding proteins [BR:
gja00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107120736 (COL6A1)
Hyaluronan
Extracellular matrix or blood plasma proteins
107120736 (COL6A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
VWA_3
DUF1194
vWA-TerF-like
Piwi
Motif
Other DBs
NCBI-GeneID:
107120736
NCBI-ProteinID:
XP_015278993
LinkDB
All DBs
Position
Un
AA seq
1013 aa
AA seq
DB search
MKPADLLLPVLLQSCLLVSRVLAQDNEITNGVAFRDCPVDLFFVLDTSESVALREKPFGA
LVDKITAFTNLFIDRLTERYYRCDRNLVWNAGALHYSDVVEVIKGLSRMPDGREDLQKRV
SSVVSIGKGTYTDCAIKRGIEELLIGGSHQKENKYLVVVTDGHPLDGYKEPCGGLEDAVN
EAKHLGIKVFSIAISPDHLESRLSVIATDHTYRRNFTATASQQQLERTIDTITSMITENV
EHGCCSYECQPARGPPGPVGDSGYEGERGKPGLPGEKGDAGEPGKQGDPGPVGYQGMKGE
KGGRGDKGSRGGKGSKGDKGKRGIDGIDGKKGEAGFHGLPGCKGSPGFDGLRGPPGSKGD
PGPYGPKGGLGDPGVDGKAGRPGNTGVPGEKGQPGAAGGPGEKGELGDEGNPGPDGPTGE
RGANGERGPLGIPGLRGPRGEKGDLGPQGDQGREGPFGPPGEPGEAGPAGPKGYRGDEGT
PGPEGPKGPLGPPGLPGDAGLMGERGEDGAPGNGTDGFPGFPGYPGNRGSPGVNGTKGFP
GPKGDDGEFGDPGEEDGTSIVQGMKGAKGYRGPEGPPGPPGPAGPPGPDECEILDIIMKM
CSCCECKCGPVDVLFVLDSSESIGLQNFQIAKDFIIKVIDRLSGDEHVRFDPGESRVGVV
QYSHDKTQELVAMGDANINNIGELKEAVKNLHWIAGGTYTGEALEFTKDQLLRRFSSENR
VAIVITDGRSDTLRDPIPLNALCEVNTQVYPLGIGDIFYSPPNPEQLSSISCNGLSILRE
NYAELLDDSFLHNITSYICKDKKCPDYTCPITFDGPADITLLVDSSTSVGSRNFNTTKKF
VKRLAERFLAASKPAEDTVRVSVVQYSGKAQQKLEAQFEQNYTVIAEAIDSMQFMNDATD
VNAALDYVTNLYRQSSRSGAKKRVLVFSDGNSQGITGSAIERAVQAARQAGIEIYVLVVG
TQANEPNIRVLVTGKTTEYDVAYGERHLFRVPDYNSLLRGVFYQTVSRRIAVN
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccgccgacctgttgctccccgtcctgctccagagctgcttgctcgtgagtcgg
gtcctcgcccaagataacgaaatcacgaacggcgtcgctttcagagattgccccgtggac
ttgttttttgtcctggatacctctgagagcgttgccttgagggaaaagccgtttggagcc
ttggttgacaagatcacagccttcaccaaccttttcattgatagattgactgagagatat
tatcggtgtgaccggaatctggtgtggaacgccggtgccctgcattacagtgatgtggtg
gaggtgatcaaggggctcagccgtatgcctgatgggcgagaggacctgcagaagcgagtg
tcctccgtggtttctattgggaaaggcacctacaccgactgtgccatcaagagaggaatc
gaagagctgctcattgggggctctcatcagaaggaaaataaatatctggttgtggtgaca
gacggccatcccttggatggctataaagagccctgcggaggactggaagatgctgtcaac
gaagccaagcacctgggcatcaaagtgttctccattgccatctctccagatcatctggaa
tccaggctgagtgtcattgccacagaccacacctatcgccgcaactttacggcaactgca
tctcagcagcaacttgagagaacaatcgacaccatcactagtatgatcacggagaacgtg
gagcacgggtgctgctcctacgaatgccagcccgcgcgaggtcccccagggccagttgga
gattcaggatatgagggagaaagagggaagcctggcctgccgggtgaaaaaggagacgcc
ggagagcctgggaagcaaggtgaccctggacctgtcggttaccaagggatgaagggagaa
aaaggaggtcgaggtgacaagggctccagaggtgggaaaggatccaagggggataaaggc
aagcgtggtatcgacggcatcgatggcaagaagggtgaagctggatttcatgggttacct
ggatgcaaaggatccccgggatttgatggcttacgtggacctcctggatcaaaaggtgac
cctggtccttatgggcccaaagggggactgggagatcctggcgttgatggcaaagcaggc
aggcctggaaatactggagtccctggagaaaagggtcagccgggagctgctggaggccct
ggagagaaaggagagttgggagacgagggaaatcctggcccagatggccccactggagag
aggggagccaatggagaaagggggccgctaggtatccctggactccgtggaccgagagga
gaaaagggtgatttgggaccacagggtgaccaaggccgtgaaggaccatttggaccacct
ggagaaccaggtgaggctgggccagctggacctaaggggtacagaggagatgaagggact
cccggaccagagggccccaaaggaccccttgggccacctggactacccggagatgccggc
ttgatgggtgaaaggggagaagacggtgccccaggcaatggcacagatggattccccggc
ttcccaggatatccaggcaacagaggtagtcctggagttaacggtaccaaaggctttcct
ggtccaaaaggtgatgacggagagtttggagatcctggagaggaagatggcacaagtatt
gtccagggcatgaaaggagccaagggatacagaggtccagagggccctccgggacctccg
ggacctgctggccctccgggaccagatgaatgtgaaattttagatatcatcatgaaaatg
tgttcatgctgtgaatgcaagtgcggccccgtcgacgttctcttcgtcctggacagttcc
gagagcattggcctgcagaacttccagattgcgaaggatttcatcataaaggtcattgac
aggctgagcggcgatgaacacgtgaggtttgaccccggagagtcacgtgttggtgttgtg
cagtacagtcatgacaagacgcaggagctggtggccatgggagatgccaacatcaacaac
atcggagaacttaaggaggctgtgaagaacttgcactggatcgctggtggcacttatact
ggggaggccctggagttcacaaaggaccagttgctgcgacgattttcctctgagaaccgg
gtggccattgttatcacagatggacggtcggacacccttcgggaccccatacccctgaat
gcgctctgtgaagtcaatacccaggtgtatcccttgggtatcggcgatattttctactct
cctccaaaccctgagcaattatccagtatttcctgtaatgggttatccattctgcgagaa
aactatgcagagcttctggatgacagtttcctgcacaacattacctcttatatctgcaaa
gacaagaagtgcccagactacacttgcccaatcacctttgatggcccggctgatatcacg
ctcctagtggatagttctaccagtgtcgggagccgtaacttcaacaccaccaagaaattt
gtgaagcgcctggccgagcggttcctggcagcatccaaacctgccgaggacaccgtgcgc
gtttcggttgtccagtacagcggcaaagctcagcagaaactggaagcgcagttcgagcag
aactacaccgtgatcgccgaggccatcgacagcatgcagttcatgaacgacgccacggac
gtcaacgccgctctcgactatgtcaccaacctctaccggcagtcttcccgctctggggct
aagaagagggtgttggtcttctccgacggcaactctcaaggcatcaccggaagcgccatc
gagagggcggttcaggcagcccggcaggcgggcatcgagatctacgtactggtggtcggc
acgcaagccaacgagcccaatatacgcgtccttgtgactgggaagaccaccgagtatgac
gtggcgtacggggaaaggcaccttttccgagtgcctgattacaactctttgctgaggggc
gtcttctatcaaactgtttccaggagaatagctgtcaactga
DBGET
integrated database retrieval system
