Gekko japonicus (Schlegel's Japanese gecko): 107120925
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Entry
107120925 CDS
T04299
Symbol
DDX23
Name
(RefSeq) DEAD-box helicase 23
KO
K12858
ATP-dependent RNA helicase DDX23/PRP28 [EC:
3.6.4.13
]
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107120925 (DDX23)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gja03041
]
107120925 (DDX23)
Enzymes [BR:
gja01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.4 Acting on acid anhydrides to facilitate cellular and subcellular movement
3.6.4.13 RNA helicase
107120925 (DDX23)
Spliceosome [BR:
gja03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
107120925 (DDX23)
Complex C
U5 SnRNP specific factors
107120925 (DDX23)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Motif
Other DBs
NCBI-GeneID:
107120925
NCBI-ProteinID:
XP_015279198
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All DBs
Position
Un
AA seq
815 aa
AA seq
DB search
MAGETVEKRERDSSPVKEERRRSRSPDRERDRDRDRKGSPLAKDRKRHRSRERRRGSRSR
SRSRSKSTERERRYKERERERNKKDREREKDGHRRDRKRSRSISPSRNKDSKSRKDRDSR
KDEEDDAGGKREKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQ
RLLEDERKKRKQFQEMGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEKDKSK
ELHAIKERYLGGVKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIA
GIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEM
TDRDWRIFREDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIG
LQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIE
EETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVLENRYLVLSRCTY
VVLDEADRMIDMGFEPDVQKILEHMPVTNQKPDTDEAEDPEKMLANFESGKHKYRQTVMF
TATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRKKLLAILEQGFDP
PIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAG
RGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAISFVTKEDSAVFYDLKQAILE
SPVSSCPPELANHPDAQHKPGTILTKKRREETIFA
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggctggggaaactgttgaaaagagagaacgggattcttcacccgtcaaagaagagcga
agacgctcacgctcaccagaccgggaacgtgaccgagatcgtgataggaaaggttctcct
cttgccaaggacaggaagcgtcaccgttcccgtgagaggaggagaggcagtaggtcaaga
tcccgctcccgatccaagtcaacagagagggaacgacggtataaagagagggaacgggag
cgcaataagaaggaccgggagcgggagaaggatgggcaccgaagagacaggaaacgctcc
agaagcatctctccaagtcgcaacaaggactccaaatccaggaaagacagagattcccgc
aaggatgaagaggatgatgcagggggcaagagggaaaaggcacagccactctccctggag
gagctgctggctaagaaaaaagctgaggaagaggctgaagccaagcccaaattcctttcc
aaggcagaacgagaagctgaggccttgaaacgccggcagcaggaggtggaggaacgacag
cggctgctggaggatgagaggaaaaaaagaaagcagttccaagaaatgggcaggaagatg
cttgaggacccccaggagagagagcggcgtgagcggagggaacgcatggaacgggagacc
aacggcaatgaagatgaggaggggcggcagaagatccgcgaagagaaagacaagagcaag
gaattgcatgccatcaaggagcggtacttgggtggggtcaaaaagcggaggcgcacccgg
cacctgaatgaccgcaagtttgtctttgagtgggatgcttcagaggacacttccattgac
tataatcctttgtacaaggagcgacaccaggttcagctgctggggcgtggctttattgct
ggcatcgatttaaaacagcagaaacgggaacagtcccgcttctatggagacctgatggag
aagcggcgcacactggaggagaaagagcaagaggaggcacgtctgcgcaagctgcgtaaa
aaggaggccaagcagcgctgggatgatcggcactggtctcaaaagaagctggatgagatg
acggacagggactggcgaattttccgggaggattacagcatcacaaccaaggggggcaag
atccccaaccccatccgttcctggaaggactcctcactgccccctcacatcttggaggtt
atcgacaaatgcggctacaaggaacctactcctatccagcgtcaagccatccctattggt
ctgcagaaccgtgatatcattggtgtggccgagaccggcagtggtaaaaccgctgccttc
cttatcccactgctggtatggatcaccaccctgcccaagatcgacaggattgaggagtca
gatcagggcccttacgccatcatcctggcccccacccgtgagttggctcagcagatcgag
gaagagaccatcaaatttggaaagcctctgggaatccgcacagtggctgttattggtggc
atctctcgtgaggaccaaggcttccggctgcgcatgggctgtgagattgttatcgccact
cctggccgtctcattgatgtgctggagaaccgttacctcgtgttgagccgctgcacctat
gtggtattggatgaggccgaccgcatgattgacatgggctttgagcctgatgtgcagaag
atcttggaacacatgcctgtcaccaaccagaaacctgacactgatgaggctgaggaccct
gagaagatgctggccaattttgaatcgggcaagcacaaataccgacagacggtgatgttc
acagccaccatgccacctgctgtggagcgcctggcccgcagttatctgcgccgacccgcc
gtggtctacattggctcagctgggaaaccgcacgagcgtgtggagcagaaggtcttcctc
atgtcagaatcggagaagaggaagaagttgctggctattttggagcagggctttgatcca
cctattattatctttgtcaaccagaagaagggctgtgatgtactggccaaatctctggag
aagatggggtacaatgcctgcacccttcatggtggcaaaggtcaggagcagcgagaattt
gcactctccaacttgaaggctggtgccaaggacatcctagttgccacagatgtggctgga
cgtggtattgacatccaggacgtgtccatggtggtgaactatgacatggctaagaacata
gaagattatatccatcgcattggtcgaacaggaagagctggcaagagtggtgtggctatc
tcgtttgtcaccaaggaggactccgctgtcttctatgacctcaagcaggccatccttgag
agcccagtatcctcctgcccacccgagttggccaaccacccagatgcccagcacaagcca
ggaaccatcctcaccaagaagcgacgagaggagactatctttgcctga
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