Gekko japonicus (Schlegel's Japanese gecko): 107125661
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Entry
107125661 CDS
T04299
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
107125661 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gja03021
]
107125661 (SMARCD2)
03036 Chromosome and associated proteins [BR:
gja03036
]
107125661 (SMARCD2)
Transcription machinery [BR:
gja03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
107125661 (SMARCD2)
Chromosome and associated proteins [BR:
gja03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
107125661 (SMARCD2)
PBAF complex
107125661 (SMARCD2)
GBAF(ncBAF) complex
107125661 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
107125661
NCBI-ProteinID:
XP_015284594
LinkDB
All DBs
Position
Un
AA seq
444 aa
AA seq
DB search
MGPAVQFQRPGMLPGGRMPMAGMQVGSAAGPLFGTSSPMRPGMPQSMMDPFRKRLLPPQA
QPPSALTQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEIQEA
IKKPLTQKRKLRIYISNTFTPGKEDCDGSERIASWELRVEGKLLDDPSKQKRKFSSFFKS
LVIELDKELYGPDNHLVEWHRVATTQETDGFQVKRPGDVNVKCTLLLMLDHQPPQYKLDP
RLARLLGVHTQTRASIMQALWLYIKHNKLQDSHEKEYINCNRYFRQIFGCIRMRFSEIPM
KLAGLLQHPDPIVINHIISVDPNDQKKTACYDIDVEVDDPLKAQMSNFLASTTNQQEIAS
LDVKIHETIESINQLKTQRDFMLSFSNSPQDFIQEWIRSQQRDLKIITDVVGNPEEERRA
EFYQQPWMQEAVGRHIFAKVWRLT
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggggcctgccgtgcagttccagcgccccgggatgttacccggtggccggatgcccatg
gcagggatgcaggtgggctctgccgcgggacctctcttcggaacgagttctccaatgaga
cctggaatgccgcagtccatgatggatcccttccggaagcgcctgctgcctccgcaggcc
cagccaccctccgcgctgacccaaaggagagggctgaaacggaggaagatggcggacaag
gtcctaccacagaggatccgtgagctggtcccagagtctcaggcctatatggatttgctg
gcctttgaacgcaagctggaccagacgatcgcccgcaaaaggatggagatccaggaggca
atcaagaaacctttgacgcaaaagcggaagctgcgcatttacatctccaatacctttact
cccgggaaggaggactgtgacggtagtgagcggatagcctcgtgggaacttcgagtggag
ggcaaacttttggatgatccgagtaagcagaagagaaaattctcctcctttttcaaaagc
ctggtcattgagctggacaaagaactgtatgggccagacaaccacctggtggagtggcac
cgggtcgccacgacccaagagacagatggcttccaggtcaagcgcccgggcgacgtcaat
gtgaaatgcactctgctgctcatgctggaccaccagcccccccaatacaagctggacccc
cgcctggctcgcctgctgggcgttcacacccagacccgtgccagcatcatgcaggccctc
tggctgtacatcaaacacaacaaacttcaggacagccacgagaaggagtacatcaattgc
aaccgctacttccgccagatcttcgggtgcatccgcatgcgattctcagagatccccatg
aagctggcagggctgctgcagcacccggaccccattgtcatcaaccacatcatcagtgtg
gatcccaatgatcagaagaagactgcttgctatgacatcgatgtggaagtggatgacccc
ttgaaggcccaaatgagcaacttcttggcctccaccaccaaccagcaggaaattgcctcc
ttggatgtcaagatccacgaaaccatcgagtccatcaaccagctgaagacccagcgagat
ttcatgctgagtttcagcaacagcccccaggatttcatccaggaatggatcagatctcag
cagagggacttgaagattatcacagacgtggttgggaaccccgaagaggagaggcgcgcc
gagttctaccagcaaccctggatgcaggaggctgttgggagacacatctttgccaaggtt
tggagactgacctga
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