Gekko japonicus (Schlegel's Japanese gecko): 107125682
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Entry
107125682 CDS
T04299
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
gja
Gekko japonicus (Schlegel's Japanese gecko)
Pathway
gja03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gja00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107125682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gja03019
]
107125682
Messenger RNA biogenesis [BR:
gja03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107125682
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107125682
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CNOT1_TTP_bind
CNOT1_CAF1_bind
CNOT1_HEAT
CNOT1_1st
Med13_C
DUF2891
Motif
Other DBs
NCBI-GeneID:
107125682
NCBI-ProteinID:
XP_015284619
UniProt:
A0ABM1LF82
LinkDB
All DBs
Position
Un
AA seq
1212 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIENPLHYQKSLKPSPHLFTQLSKVIK
LSKVQEVIFGLALLNSFNPDLRGFAAQFIKQKLPDLLRSYIDADVGGNQEGGFQDIAIEI
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGIAKTMMESSLADFMQEVGYGFCASVEECRNIITQFGVGEVTAAQVARVLGMMART
HSGLADGIPLQSISAPGSGIWSDGRDKNDGTQTHSWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQVRDSKGLQIVVYGVQRGLGLEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLVPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SLGGSAVPHTQSMPGFPPNLGSAFSTPQSPAKAFPPLSTQNQNTPFSGIGGLSSQLPVGG
LTTSSLGIGTGALSLPAVNNDPFVPRKLSTSGLNQPTFQQSKMKPSDLSQVWPEANQHFS
KEIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRF
FPQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFASKMYYFGIAALDRF
KNRLKDYPQYCQHLASISHFIQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQ
AQAQAPAKTPLAGQVSTIVTTSTTTTTVAKTTITPVGRVSFKKDVPPSINTTNIDTLLVA
TDQTERIVEPPENVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSI
EPNFHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGM
ITLAKNKPILHT
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaagaaatacaacatattgtgaatcggcacggc
cccgaggcagacaggcatttactacgctgcctattctcgcacgtggatttcagtggcgat
ggtaaaagtagcggcaaagatttccatcagactcagtttctgatccaggagtgcgcgtca
ctgattacgaaaccaaactttatttcgacactgtcctatgctattgaaaaccctttgcac
tatcagaagagtcttaagccatcacctcatctattcactcagctaagcaaagttatcaaa
ttaagcaaggttcaagaggtcatttttggtcttgcgttgctgaactctttcaatccagat
ctacgaggttttgcggctcagtttattaaacagaagcttccggatcttctgcgttcatac
attgacgcagacgttggtggaaatcaagaaggtggcttccaggacatcgcaatagagatc
ttgcacctcctcctttcccatcttctttttgggcagaagggagcctttggggttggacaa
gaacagattgacgcttttctcaaaaccttacgtagagattttccccaggaacgctgccct
gtggtgcttgcaccactcctctaccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggagggattgcaaaaacaatgatggagagttctcttgcagacttcatgcag
gaagttggctatggtttttgtgcaagcgtggaagaatgtcgcaacatcatcactcagttt
ggtgtcggggaggttacagctgcccaggtggccagggttttgggaatgatggctcgaacg
cactcaggattggcagatggtattccattacagtccatctcagctcctggtagtggaatt
tggagtgatggaagagataaaaatgatggaacgcagactcattcgtggaatgtagaggtt
ctgattgatgtgcttaaagaactgaacccaagtttgaacttcaaggaagtaacctatgaa
ctagatcaccctggatttcaagttcgtgatagtaaaggcttgcagattgtggtgtatggt
gtccagagagggctaggacttgaagtctttccagttgacctcatctacagaccttggaaa
catgcagaaggccagctctcattcatccaacattccctcattaacccggagatcttctgt
tttgctgactacccctgtcataccgttgccacagatatcttgaaagcaccacctgaggat
gacaatcgagaaattgccacatggaagagcctggacttgatagagtcattgttgcggttg
gcagaggtgggacagtatgaacaggtcaagcagctcttcagcttccctatcaagcactgt
ccagatatgttggtattggccttacttcagatcaacacttcctggcacactttgcggcat
gaactaatctccacactaatgcccattttccttggcaaccatcctaattctgccatcatc
ttgcattatgcatggcatggacagggccagtctccttcaattcgccaactcatcatgcat
gcaatggcggaatggtatatgagaggggagcagtatgatcaggccaaattatcacgtatc
ctagatgttgcccaagacttgaaggcgttgtcaatgctgctaaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgggaatacctcaaactagacaaatgg
ctcacagataaaattcgagagcatggggaacccttcatccaagcctgtatgactttccta
aaaagaagatgcccttctatcttgggtggccttgtcccagagaaagaccagccaaaaagc
gctcagcttcctccagagacgttggcaactatgttggcttgcttgcaagcttgtgcagga
agtgtctcacaagagctgtcggaaactattctcaccatggtagccaactgcagtaacgtc
atgaacaaagctaggcaaccaccacctggagttatgcccaaaggacgtccacccagtgct
agcagtctggatgccatctctcctgtacagatcgacccgcttgctgggatggcatctctt
agtttaggtggttcagcggtccctcatacccagagtatgcctggttttcctccaaacctg
ggttcagcctttagtactcctcagtcaccagcaaaagcatttcctccgctttctacgcaa
aaccagaacacaccttttagtggaattggtggactctcatcacagcttccagttggtggt
cttacaacaagtagtctgggtataggaactggggccctcagcctccctgcggtgaataat
gacccctttgtgccaaggaaactgagcacatcaggactgaaccagcctacattccagcag
agtaagatgaaaccttctgacttatctcaggtatggccagaggcaaatcagcactttagc
aaagaaattgatgatgaagccaacagttattttcagcgaatttataatcaccctccacat
ccaactatgtctgtagatgaggtgttagaaatgctacagaggtttaaagactccaacatt
aaacgggaacgtgaagtatttaactgtatgctgaggaacttgtttgaggagtatcgcttt
ttcccccagtacccagataaagagctacacataacagcctgcctgtttggtgggataata
gagaaaggactggttacctatatggccctgggcctggccttgcgctatgttcttgaagcc
ttacgaaagccttttgcatccaaaatgtattattttggtattgctgcactagatagattt
aaaaatagattgaaggactatccccagtattgtcagcacttggcttctattagtcacttt
atacagttccctcatcacctgcaggagtacattgaatatggacagcaatcaagagatcct
cctgtgaagatgcagggttcaatcaccacccctggaagtattgcacttgcccaagctcag
gcccaggctcaggctccagcaaaaactcctcttgctggtcaagttagcactatagtaacc
acatccaccacaaccactactgtggccaagaccacaatcactccagtgggccgagtcagc
ttcaagaaggatgtgccgccatcaattaatacaaccaacattgataccctgctggtggcc
acggatcagacagagagaattgtggaaccccctgaaaatgtacaggagaagattgccttt
atcttcaacaacctgtctcaatccaatatgactcagaaggttgaagagctgaaggaaaca
gtgaaagaagagttcatgccttgggtttcacagtatctcgtgatgaagagagttagtatt
gagccgaacttccacagcctctattcaaatttccttgacacccttaagaatccagaattc
aacaaaatggttctcaatgaaacctacagaaatatcaaggtactgcttacatctgataaa
gctgctgccaacttctcagaccgttctctgctgaagaacttgggtcactggttggggatg
atcacgctggcgaagaacaagcccatcttgcacacg
DBGET
integrated database retrieval system
