Geobacillus genomosp. 3: M493_14620
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Entry
M493_14620 CDS
T02798
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
gjf
Geobacillus genomosp. 3
Brite
KEGG Orthology (KO) [BR:
gjf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gjf03016
]
M493_14620
Enzymes [BR:
gjf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
M493_14620
Transfer RNA biogenesis [BR:
gjf03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
M493_14620
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
DUF2576
DUF1122
Motif
Other DBs
NCBI-ProteinID:
AGT33162
UniProt:
S5Z8L2
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All DBs
Position
complement(2737470..2738048)
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AA seq
192 aa
AA seq
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MKRNHYFIAVPLTAEAKHAIARFAADAAPSLPFRTWVHEQDYHITLVFLGDVPPEKMGPL
WEAVSAAASRYAPFSLALAGLGTFGERTAPRIFWQGVKAEKTLDALRRDVYEACLRLGFS
LDRRPFAPHITIARKWRGAAPLQPEALRSLPAASAVFSVPEIVLYRTNMEQTPKYEAIAS
FPLLGARAGQSG
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaaccattattttattgccgttccgctgacagcggaggccaaacacgccatt
gcccgttttgcggcggatgcagcgccatcgcttccgttccgtacatgggtgcatgagcaa
gactaccatattacccttgtgtttttgggggatgtgccgccggagaaaatgggcccgcta
tgggaagcggtgtcggcggccgcttctcgctatgcgccgttttcccttgcgcttgcgggg
ctcgggacgttcggggaacgcacagcgccgcgcattttttggcaaggggtgaaggccgag
aaaacgctcgacgcgctgcgccgcgatgtgtacgaggcgtgcctgcggctcggcttttcc
cttgaccggcggccgtttgccccgcacattacgatcgcccgcaaatggcggggcgccgcg
ccgttgcagccggaggcgctccgctcgctcccggccgcttcggcggtgttttcggtgccg
gaaattgtgctgtaccggacgaatatggagcagacaccgaaatacgaagcgatcgcctcg
ttcccgctgcttggcgcccgagccggccagagcgggtga
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