KEGG   Geobacillus genomosp. 3: M493_14620
Entry
M493_14620        CDS       T02798                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
gjf  Geobacillus genomosp. 3
Brite
KEGG Orthology (KO) [BR:gjf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:gjf03016]
    M493_14620
Enzymes [BR:gjf01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     M493_14620
Transfer RNA biogenesis [BR:gjf03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    M493_14620
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2 AKAP7_NLS DUF2576 DUF1122
Other DBs
NCBI-ProteinID: AGT33162
UniProt: S5Z8L2
LinkDB
Position
complement(2737470..2738048)
AA seq 192 aa
MKRNHYFIAVPLTAEAKHAIARFAADAAPSLPFRTWVHEQDYHITLVFLGDVPPEKMGPL
WEAVSAAASRYAPFSLALAGLGTFGERTAPRIFWQGVKAEKTLDALRRDVYEACLRLGFS
LDRRPFAPHITIARKWRGAAPLQPEALRSLPAASAVFSVPEIVLYRTNMEQTPKYEAIAS
FPLLGARAGQSG
NT seq 579 nt   +upstreamnt  +downstreamnt
atgaaacgaaaccattattttattgccgttccgctgacagcggaggccaaacacgccatt
gcccgttttgcggcggatgcagcgccatcgcttccgttccgtacatgggtgcatgagcaa
gactaccatattacccttgtgtttttgggggatgtgccgccggagaaaatgggcccgcta
tgggaagcggtgtcggcggccgcttctcgctatgcgccgttttcccttgcgcttgcgggg
ctcgggacgttcggggaacgcacagcgccgcgcattttttggcaaggggtgaaggccgag
aaaacgctcgacgcgctgcgccgcgatgtgtacgaggcgtgcctgcggctcggcttttcc
cttgaccggcggccgtttgccccgcacattacgatcgcccgcaaatggcggggcgccgcg
ccgttgcagccggaggcgctccgctcgctcccggccgcttcggcggtgttttcggtgccg
gaaattgtgctgtaccggacgaatatggagcagacaccgaaatacgaagcgatcgcctcg
ttcccgctgcttggcgcccgagccggccagagcgggtga

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