Gordonia jinghuaiqii: H1R19_15555
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Entry
H1R19_15555 CDS
T07538
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gji
Gordonia jinghuaiqii
Pathway
gji03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gji00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H1R19_15555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gji03400
]
H1R19_15555
Enzymes [BR:
gji01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
H1R19_15555
DNA repair and recombination proteins [BR:
gji03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H1R19_15555
Prokaryotic type
H1R19_15555
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-ProteinID:
QMT00326
UniProt:
A0A7D7QMX0
LinkDB
All DBs
Position
complement(3489920..3490603)
Genome browser
AA seq
227 aa
AA seq
DB search
MTAPQKPLAEIIDPGWAEALAPVEPIITEMGRFLRNEVAQGRRYLPAGQNILRAFTRPFD
DVRVLIVGQDPYPTPGHAVGLSFSVAPDVRPIPRSLTNIYTEYCSDLGYPMPGNGDLTPW
ADNGVLLLNRVLTVAPGEPASHRGKGWEEVTECAIKALAYRDEPLVAILWGRDAAGLEKW
LPDVPTIVSAHPSPLSASRGFFGSKPFSRANEELLDLGAEPVDWRLP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcaccacagaagccgctcgccgagatcatcgaccccggttgggcggaggcgctc
gcgccggtcgagccgatcatcaccgagatgggccggttcctgcgcaacgaggttgcccag
gggcgccgctatctgcctgcgggacagaacatcttgcgggcgttcacccgccccttcgac
gacgtccgtgtcctgatcgtcggacaggatccgtacccgactcccggacatgccgtcgga
ctgagcttttcggtggcgccggatgtacggccgatcccgcggtcgttgaccaacatctac
accgagtactgcagcgacctcggatatccgatgcccggcaacggggatctgacgccgtgg
gccgacaacggtgtactcctgctcaacagggtgctcaccgtggccccgggtgagcccgcc
tcgcatcgcgggaaggggtgggaagaggtcaccgagtgcgcgatcaaggcgctggcgtac
cgcgacgagccactggtcgcgatcctgtggggccgggatgcggcgggactggagaagtgg
ctgccggatgtgccgaccatcgtctcggcacatccgtcaccgctgtccgcgtcgcggggc
ttcttcggctcgaaaccgttcagccgcgccaacgaggagctcctcgatctcggcgccgaa
ccggtggactggcgcctgccctga
DBGET
integrated database retrieval system
