Gilvimarinus japonicus: R50076_23570
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Entry
R50076_23570 CDS
T10758
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
gjp Gilvimarinus japonicus
Pathway
gjp00040
Pentose and glucuronate interconversions
gjp01100
Metabolic pathways
gjp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
gjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
R50076_23570
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
R50076_23570
Enzymes [BR:
gjp01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
R50076_23570
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
BFM21308
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Position
2787406..2788560
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AA seq
384 aa
AA seq
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MKTVTFSSILALTATLSACGGSGGPTGSDPTYPESSSSSSEASSSVSSESSSTESSSSSS
VANQCDTMNTVVGFASLGAGTTGGAGGDTTTVTTGSELAAALASKGSNPLTIFVDGTITP
DNSNVDKFDVKEMSDVSIIGVGDSAMLDGIGIKVYKSDNIIIRNLTIRYVDIGEKDGISL
EGPASNIWIDHNEIYNDLNSDKDYYDELVSGKRDVDNVTISYNYLHDSWKTSLWGSSDDD
NNHRRITFYANYWENASSRMPLFRFGEAHILNNVYKDVTSTAVNSRMGANIRVEGTVFEN
VQNPIVSFYSEEVGYWDLADNVYDNITWSNPAGGDLIAGPGTDLTSTVSYTPEYEYTAMA
GADTKAHVIANAGSGKITSCLPTP
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagtcactttttctagtattctggcattaacggccaccctcagcgcctgcggc
ggctcgggcggccctactggcagtgatcctacttacccagaaagttcttcatcgagcagc
gaagccagctcgagtgtctcgagcgaaagttcgtccaccgaaagctcctccagcagctca
gtcgccaaccaatgcgacaccatgaataccgtggtcggctttgccagtttaggtgcgggc
actaccggtggcgctggcggcgacaccactacggtaaccaccggttccgagttagcagcc
gcactggccagtaaaggcagcaacccattaaccatttttgtcgatggcaccattaccccg
gacaactccaacgtcgataaatttgatgttaaagaaatgtccgatgtctcgattatcggg
gtcggcgacagcgccatgctcgatggtattggcattaaagtgtacaaatcggacaacatt
attatccgcaacctgaccattcgctacgtcgatatcggcgagaaagacggcattagcttg
gaaggcccggccagcaatatttggatcgaccacaacgagatttacaacgacttaaacagc
gacaaagactattacgacgagctcgtcagtggtaaacgcgatgtcgataatgtcactatc
tcgtacaactatttgcacgacagctggaagacctcactgtggggcagcagcgatgatgac
aacaaccatcgccgcattaccttctacgccaactactgggaaaacgccagctcgcgcatg
ccgctgttccgctttggcgaggcacacattctaaacaacgtctacaaagatgttacctct
accgccgttaactcccgcatgggcgccaacattcgtgttgaaggcactgtatttgaaaat
gtgcaaaaccccatcgtcagcttctactctgaagaggtgggctactgggatttagccgac
aacgtctacgacaacatcacctggagcaatcccgccggcggtgacttaatcgcaggcccc
ggcaccgacttaacctctaccgtgagctatacaccagagtacgagtacaccgccatggcg
ggcgcggacaccaaagcccacgttatcgctaatgccggcagcggcaaaattaccagctgc
ttgccaacgccctaa
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