Giardia lamblia: GL50803_00112114
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Entry
GL50803_00112114 CDS
T01047
Name
(RefSeq) putative Splicing factor-like protein
KO
K12856
pre-mRNA-processing factor 8
Organism
gla
Giardia lamblia
Pathway
gla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
GL50803_00112114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gla03041
]
GL50803_00112114
Spliceosome [BR:
gla03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
GL50803_00112114
Complex C
U5 SnRNP specific factors
GL50803_00112114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
U6-snRNA_bdg
PROCN
U5_2-snRNA_bdg
PRP8_domainIV
PRO8NT
RRM_4
Motif
Other DBs
NCBI-GeneID:
5697717
NCBI-ProteinID:
XP_001704838
UniProt:
A8BTS5
LinkDB
All DBs
Position
1:191293..198222
Genome browser
AA seq
2309 aa
AA seq
DB search
MQSLKPRLLQSVQPTLVGSTENSSFPSQPRSMARKLAAMGSLKFLVYAIRKALETMPQPW
EAVRYVTVAHQKAGALTYILSKSTSSEHDLIRQWTRVCDSIPKDAAPPSYPIFDGTAPYM
CYRDNLAFARPLPLFKTNAIIRFHRLKNLCADLSATQKILLSDSRRSLKSRDKFSFEQHL
PSVFTNLSSFHGDDNFLMYQHVYLYHAYTEDQLLTYPALYYPISMHPPANLPIFLSPSPS
AFCGTFLDRRKSNLMHINSSAMLSRSAQINEYSDAIQSSLQTSTYRSPSLLSPPLSSARK
SFHKREIKSKSVTTILRTSPQFSIISNVDWLEAAQHLLAQAHDAMTLMLHRKNITFLSLD
YNFNLTHTKVLSTKERKQSRFGKAFHLVRELTKFLKYMVDTHIAHRLLLIDYPTFLTGIH
HLFLNIGTVTSVYRYKYKISNQIRQLKALGMLCGDVPFYHPLQCVMNSYLRGLSPLLEAY
LSRLLARTAGIIDKDSGNSSRRVTHQRSLANQIVEQRNRYAGRFVSMYPQFTTRSAMTKL
FLAHLAEAWLCWRAGMAYDQVYSQMSPEVADLVQAYVSERADLYTASIACTKKRIASNKW
IAKSEHYKYCGRAGRQDMRELIVANAAYLCEPIQKDLRVSLGTVYSLAYLCITVAARVCA
CGSHIPFPSQEFEYDGKLLELALRDLREDVLSGSILTVADRQLLTLIEKATSLPHEFLIR
IKEILLKKRTFDAVQIEYAEARTCVYPIYLTTGLTRVVDVYFTYYLSYQITSSPLHYLLF
KRGFSSIDLSNPYSMELPAELTIRYCKHVHSTCSGLPATDGEGCFLVHMHLNTDSYFRGF
NLHVIGKVISLLFDPVISSFLITRLSSSFYFKDMTYTAVRGVAPSFQFSHFLLTLLLSIL
DLTILLHYDEQPFSPTIILRVVTFIIAFAKDYRQSGVPLSQLWLRKACLEKGIDLSRLSI
FYGTYKLLSYVRQGESLYLVLQEDRQANIESSKTTIMEQVMKSIPQSIACYISRQSSFCD
NQTFYFVSLVNQPIRFEFMGYIILAKSIKDLGMSTNILHSVSATFIANFIYHANQLISSA
VSTSFSKIIAKWNSLLLNCVIYYREALLQSPRFLRILMAYEEKVCNKIKQGLNSKMPNRF
PNVIFYSPRELGGLGMLSVGSAGVYPSSEELNPKYPVAERSRRWDQKHQEVLLPSVIHFI
SPWADELNRSFLGYQRLLSIFCEFYNGRSPLFGAQTGFYVYEYDACGAEQQYSFKEISEC
LSSQWTGFAVSTFREAVFQALSQGSNSIEQQSPLEIAWANGCIPRLTTLIHYAKDLYCLL
YRNPFLHHLAKGISIGNALTLKSWYNKKLLGSLYDLQGYKKIITAIFGGVEEILHHTLYP
ATDFSDYKSVVWSTATEHETGLAKRTNLTRARRQGLSQIPNRRFALWWSPTINRSSVYIG
YRSQIDLTGVYMCGKLATLKTAYVSLFRGHAWPMIHSSLVKTLLAILQDAFRGLPLDTIK
AESVHPRKSYHYHTSCADISVTWTRSLTVQQDYSIQIQKGSSEPHHNSQEESSGAHASSG
EQVDSCTHLWWIDLHLTWGNVDTCTSLAKYSKDRHKYYTSDRSRGIYRSPHGIIICIDLL
YREIAAYGSVPTIAIPAINKAISELLESLHSNTMMNMLADRIRTQLGLSSSSVHKLTDIT
PSSIGDLFTGKVIIVDDSLAYNFRMLNRDDTRASRVIINGFISIFNPQTGRLVLSVVHAD
TYAGQSRRASLSRWRTADLLTGYISSLPQALRPTTVVVCSRQSIDPIRTLLSVLNPPIVV
RGTSLHWQFQNIRSMVICAEGQEGHIRGTVNEVIQLQQTSISLSIDLYAQFRGTDEQTGL
ILEGTPIQHFIAVLLMLQLANLSPLTIYKIISQSNLELKKSLPEAELAYRPTYASLTTKS
MERLSTIGNLTDFVLHLPRAPYQQWCPVISAMTERVINESAKKLGVRSDCLSPAEKKDLV
LGAELVISNAPERRTSIFSRLVLSANTLGERMLSSTQPKEVTDVRSQSRLSNLHFGEQWL
CLQRNAIFCKLFAASQPKADADTDSSFCRSIIDQAVGATTDNSSRLCVIIGQVTKSQPIL
PCSGLQAPVALTFGLQHSVTMNGKPRTLIELRHIRAYLGGWDFFSYAAIPITELLQDVKF
TEEKTGMKFYGVLVDFSRAKLFPDKLLESSTLKKSSVDIISLVGRTTSVCLLTFYFGADR
IEKQSNFCTYYLKQSNTDKTVDQKEFSRVRVHVASNYSLEFYCIDPITQCEKPGGIDQSV
SYQSCIQFSKLFASTQIEWEELECHVDRI
NT seq
6930 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcgctaaagccgcggcttctacagtctgtacaaccaacattagtggggtccacc
gaaaactcctcttttcctagtcagcctcgctctatggctagaaaactagctgccatgggg
tctctcaaattcttagtttatgctattcggaaggctctggaaactatgccacagccttgg
gaggcggtcaggtatgtgactgtagcacaccagaaggcgggggcactgacatatattttg
agcaaaagtacttcaagcgaacacgacctcattaggcaatggacacgtgtttgtgactct
atcccaaaagatgctgcccctccgtcttatcctatatttgatggtacagccccatatatg
tgctacagggacaatctggcctttgcacgacccttgccactcttcaagacaaatgccatc
atcagatttcatcgactaaaaaatctatgtgctgatctaagtgctacgcagaaaatattg
ctgagtgattcacgtagaagtttaaagagtcgagataaattttcgttcgagcaacaccta
ccatcagtatttactaacctctcctctttccatggtgatgacaactttttaatgtaccag
cacgtttacctttatcatgcttatacagaagatcagttgctcacttatccagccctatac
taccccatctccatgcatcctccagctaatctccctatctttctttcaccgtctccttct
gccttttgcggtacgtttcttgatcgaagaaaaagcaatctcatgcacattaatagctct
gctatgctttctcgctcggctcaaattaacgagtatagtgatgcaattcagtcctcttta
caaacatctacttatagatcaccatccttacttagtcctcctctcagttccgctagaaaa
tcttttcataagagagagataaagagcaaatctgttacaacgatacttcgcacctcacca
caattctctatcatatctaatgttgactggcttgaggcagctcaacatctccttgcacaa
gcacacgatgccatgactcttatgctgcatcgcaaaaatatcacattcctctctctcgat
tataactttaacctgactcacacgaaggtcctgtctacaaaggaacgtaaacaaagccgc
ttcggcaaggcattccacttggtgcgcgagctcacgaaatttcttaaatacatggttgac
acccatattgcccatagattgcttctaatagactatccaacttttttaactggcatccat
catttgtttttaaatattggaactgtgacatctgtataccgttataagtataagatttca
aaccaaataagacagctaaaagcccttggaatgctttgtggagatgtacctttttatcac
ccgctgcagtgcgtaatgaacagctacttaagaggccttagtcccttgctggaggcatat
ctaagtcgactcttggcgagaaccgcaggaattattgacaaggactctggaaactcgtct
agacgagtcacccaccaacgatccctagcaaaccaaattgtggagcagcgaaatagatac
gccgggcgatttgtttcaatgtatcctcagttcaccacaagatctgccatgacaaaacta
tttttggcccatttggcagaggcctggctttgttggcgggctggcatggcctacgatcaa
gtatattcacaaatgtcccctgaagtagcagatcttgttcaagcttatgtttctgaacgg
gcagatttatacacagcttctattgcatgtacaaagaaacgcattgcaagcaataagtgg
attgcaaaatcagagcattacaaatattgcggtagagctggaaggcaagatatgcgagag
ctgatcgttgctaatgcagcatacctttgtgagcctattcaaaaggatctcagagtctct
cttgggaccgtttatagtcttgcttatctttgcataactgttgcagcacgagtgtgtgcg
tgtggatcacatattcccttcccatcccaagagtttgagtatgacggaaaacttctggaa
ctggcgctcagggatttacgtgaagatgtgctctccggctctattcttacagttgctgat
cgccagctcctaacacttattgaaaaggcgacttctcttcctcatgagtttctcatacgg
atcaaggagattcttctcaagaagcgtacatttgatgcagtacaaatagagtatgccgaa
gcacgaacatgtgtctatcccatatacctcaccactggactcactcgggttgttgatgtt
tatttcacatattacctaagctaccagatcacatccagccccctgcactatttacttttt
aagcgaggattcagctccatcgatctaagtaatccatattctatggagctccccgcagag
ctcaccatcagatactgcaagcatgttcacagtacgtgctcgggcctccctgcaacggat
ggtgaggggtgctttctagtccacatgcatcttaatactgatagctactttcgcggcttt
aatctgcacgtcattggtaaagtcattagcctactctttgatcctgtcatctcttctttc
ctgataactcgcctttcctcaagtttttactttaaagatatgacatatacagcagtgcgt
ggtgttgctccttctttccaattttctcattttttgttaacacttctattatcaatcctt
gacttaactattctactacattatgatgagcagcccttttctccgacgattattctgaga
gtggtcaccttcattattgcgttcgcaaaggattatcggcaatcaggggtgcctctcagt
caactctggcttcgtaaagcatgtcttgagaaggggattgatctatcccggctttctatt
ttttacgggacgtataagcttctgagctatgttcgtcaaggagagagcctatacttagtt
cttcaagaagataggcaagctaatattgagagttctaaaaccactatcatggaacaagtc
atgaaatctatcccccaatctattgcatgctacatttcacggcaatcttctttctgtgac
aatcagacattctacttcgtgtctctcgtgaaccagcccatcagatttgaatttatggga
tatatcattttggctaaaagtattaaggatttgggcatgtctactaatatattgcactct
gtttcggctacatttattgccaattttatttatcatgcaaatcaattaatttctagcgcc
gtgtctacgtccttttcaaagatcattgctaaatggaactccttgctacttaattgcgtt
atttactatcgcgaggcactgctacaatcacctaggttcttacgcatccttatggcttat
gaagagaaagtctgcaacaaaatcaagcaaggacttaattcaaagatgccaaaccgcttt
ccaaacgtcatcttttattcgcccagagagttaggcgggctaggtatgctatccgttgga
tctgcaggcgtatacccttctagcgaagagctaaatccaaaatatcccgttgcagagcgg
tctcgtcgttgggatcagaaacaccaggaggtgctacttccaagtgtcattcactttatt
tctccgtgggctgatgagcttaatcgtagcttccttgggtaccagcgtcttctgtctatc
ttctgtgagttttacaatgggcggtcccctctcttcggcgcacaaactgggttttacgtg
tatgaatatgatgcgtgtggggcagagcagcagtatagtttcaaagaaattagcgaatgc
ttatccagtcaatggactggatttgcagtcagtaccttccgtgaagcagtttttcaagca
ctctcccaagggtctaatagtattgagcagcaatctcctcttgagattgcatgggccaat
ggatgcataccgcggctaacaactctgatacattacgccaaagacctttattgtctgttg
taccgcaatccgtttctacatcacttggctaagggcatcagtataggcaacgcgctaact
cttaaaagttggtacaacaaaaagcttctgggatcactgtatgatcttcaaggatacaag
aagattatcacggcaatatttggtggggtagaagaaatattgcaccacacactctaccca
gcaacagattttagtgattataaatccgtggtgtggagcacagcaaccgaacatgagact
ggattggcaaaaagaacaaacctaacacgtgcaaggagacaggggctttcgcaaattccg
aaccgacgctttgctctctggtggagtcccacgatcaatcgtagttctgtctacatcgga
tatcgttcacaaatagacttaaccggagtgtacatgtgtgggaaattggccactttaaaa
acagcatatgtttctctgttcaggggccatgcttggccaatgattcactcctcattggtc
aaaacccttcttgcaatcttacaagacgcttttcggggccttccgcttgataccatcaag
gcagagtccgtacatccccgaaagtcatatcattaccatacaagctgtgcagacatttct
gtaacatggacacgttcattgactgttcagcaggattattccattcagatacaaaagggt
tcatcagagccgcaccataattcacaagaagagagtagtggcgcacacgcgtcttcagga
gaacaagtcgatagctgcacacatttatggtggatagacctccatctcacgtggggaaac
gtcgatacatgtacttctctcgcgaagtactctaaagaccgtcacaaatattatacatct
gatcgttcacgagggatatacaggagcccacacggaattattatttgtattgacttacta
tatcgtgaaattgcagcctatggatctgtcccaactatagcgattccagccataaacaag
gccatttcagaactgttggaatccttacacagtaatactatgatgaacatgcttgcagac
agaatcaggacgcaactgggactaagttcttcaagtgtgcacaagctcacagacatcact
ccatcctccatcggagatctgttcactggcaaggtaataatagtcgatgactccttggca
tataacttcaggatgctgaacagagatgatacgcgtgcatctcgtgttatcatcaatggg
ttcatttcgatcttcaatccccagactggccgcttggtactttcggtcgtccatgcagat
acgtatgcaggccagagtcgccgggcttctctaagccgctggcgtacggcagacttacta
acggggtacatctcttcgcttccacaggccttacgacccacgacagtggttgtatgttcc
aggcaatctattgatccaattaggaccctgcttagtgtgcttaatccacctattgttgta
cgcggaactagtttgcactggcaatttcaaaatatacgtagcatggttatctgcgcagaa
gggcaagaagggcatattcgaggaactgtgaatgaggtgattcagcttcagcaaaccagt
atctctttaagcattgatttatatgctcagtttcgaggcacggatgagcagacggggtta
attttggaaggtactcccatccaacattttattgctgtcctacttatgttgcaacttgct
aatctttcaccactcaccatatacaaaataatatctcaatcaaatctggagttgaaaaaa
tccctaccagaagcggaactagcttacagacccacgtatgcatcactgactactaagtct
atggagcgactctcaaccataggcaacctcacagactttgtcctgcatcttcctcgggcg
ccttatcaacaatggtgcccagtgatctccgcgatgaccgagcgcgtaataaatgaatct
gctaaaaagctaggagtacgttcagactgtttatctccagctgaaaagaaggaccttgta
ttaggcgcagagctggtaatatctaatgctcccgaacgcagaacaagcatcttctcacga
cttgtgttatctgccaacactctgggcgaacggatgctttcatcgacacaaccaaaagaa
gtcactgacgttagatcacaaagccgactcagcaatttgcatttcggtgagcaatggtta
tgcctccaaagaaacgctattttctgcaaactatttgcggcatcacaacccaaagcagat
gcagacacagactcatctttttgtagatcgattattgaccaagctgttggtgctactaca
gataacagttcacgactttgtgttataattgggcaggtcacaaaatcgcaaccaatctta
ccatgctcaggcctgcaagcaccagttgctctgacatttggattgcaacatagtgttact
atgaatgggaagccccgaacacttattgagctacgacatatacgtgcttatctgggagga
tgggacttcttctcgtacgccgcgataccaataacggagttattacaagatgttaagttc
acagaggagaaaacagggatgaagttttacggggtactggtggatttttcacgggcaaag
cttttcccagataagctactagaaagttctacattgaaaaaatccagtgtcgatataatt
tctctggtaggaagaacaacctccgtatgcttactaaccttctattttggggccgataga
atagagaagcaatccaatttttgcacgtattacctaaagcaatcaaacactgacaagact
gtggatcaaaaggagttcagtcgtgtgcgagtacacgtggcatctaattacagtctagag
ttttattgcattgatcccattacccaatgcgaaaagccaggtggcatcgatcaatcagta
tcgtatcaatcatgtattcagttctccaagctttttgcctcaacgcagatagaatgggaa
gaattggaatgccatgtggatcgaatatga
DBGET
integrated database retrieval system
