Geobacillus lituanicus: GLN3_11005
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Entry
GLN3_11005 CDS
T05193
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
gli
Geobacillus lituanicus
Pathway
gli03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GLN3_11005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gli03021
]
GLN3_11005
03400 DNA repair and recombination proteins [BR:
gli03400
]
GLN3_11005
Enzymes [BR:
gli01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GLN3_11005
Transcription machinery [BR:
gli03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GLN3_11005
DNA repair and recombination proteins [BR:
gli03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GLN3_11005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
SAM_EPH
RAD51D_N
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ASS87557
LinkDB
All DBs
Position
2207814..2208758
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVELSEDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIDGVVEDVTAIILNIKKLALKIYSDEEKTLEIDVQGEGVVTAADITHDSDVEI
LNPDLHIATLAEGGRLRMRMTARRGRGYVPAEANKREDQPIGVIPIDSIYTPVSRVSYQV
ENTRVGQVTDYDKLTIDVWTDGSIGPKEAISLGAKILTEHLNIFVGLTDEAQNAEIMVEK
EDDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEDMMKVRNLGRKSLEEVK
AKLAELGLSLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaattgaaaagccgaaaattgaaacggtcgaactgagcgaagatgccaaatac
ggcaaattcgtcgtcgaaccgcttgagcgtggatatggtacaactttagggaactcctta
cgtcgtatcctattgtcttcactccctggtgcggctgtgacatcggtgcaaatcgacggt
gtactgcacgagttttcaacgattgacggcgtcgtcgaggatgtgacagccatcatcttg
aatatcaaaaaattggcgttgaagatttattcagacgaagagaaaacgttggaaattgat
gtgcagggtgaaggagttgtcacggctgccgatattactcacgacagcgatgtagaaatt
ttaaacccggaccttcatattgctacgctggcggaaggcggtcgcctgcgcatgcgcatg
accgccagacggggacgtgggtatgtcccggccgaggcgaacaagcgcgaggaccagccc
atcggcgtgattccgatcgactctatctatacgccggtctcccgtgtttcctatcaggtc
gaaaatacacgggtcggccaagtgaccgactatgacaaattgacgatcgacgtttggacc
gatgggagcatcgggccgaaagaagccatttcccttggggcgaaaattttaaccgagcac
ttgaacatttttgtcggcttgacggatgaagcgcaaaatgctgaaatcatggtagagaaa
gaggacgatcaaaaagaaaaagtgctggaaatgacgatcgaggagctcgatctgtctgtc
cgttcctacaactgcttgaagcgtgccggcattaacaccgttcaggagctgacgcaaaaa
acggaagaggatatgatgaaagtgcgcaacctcggccgcaaatcgctcgaagaagtgaaa
gcgaagttagcggagctggggcttagcctccgtaaagacgattaa
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