Geobacillus lituanicus: GLN3_13630
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Entry
GLN3_13630 CDS
T05193
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
gli
Geobacillus lituanicus
Brite
KEGG Orthology (KO) [BR:
gli00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gli03400
]
GLN3_13630
Enzymes [BR:
gli01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GLN3_13630
DNA repair and recombination proteins [BR:
gli03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
GLN3_13630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_30
ResIII
AAA_16
AAA_12
Tox-SHH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ASS87961
LinkDB
All DBs
Position
2728808..2732536
Genome browser
AA seq
1242 aa
AA seq
DB search
MSVAFRPKPAGSRWTDEQWKAIVAGGRDVLVAAAAGSGKTAVLVERIIQKVTAEDEATDI
DRLLVVTFTNAAAAEMKARIGEALERELAKRPHSLHLRRQLSLLNRASISTLHSFCLDVI
RKYYYLLDLDPSFRIADETEIELLKEDVLEELLEEEYGKADNERFFAVIDAYTGDRSDAE
LQDMIFALHDFSRSHPAPDEWLKGLVSMYEVDEQTPPESLLPSRYINQHAAMELAAAKRL
IERALRLAQEPGGPRPYEKRLREDAAVVAELERWRSQSWEGLYRALQSLAFGRLPGCRGD
GYDKWLVDEAKSLRDQAKKKLEALRDNIFSLPPSVWIRHMREMKPAVETIVALVRRFSAR
FQAVKREKGIVDFSDLEHYCLHVLRQRDPKTGEWQPSAAALEYQAQFDEVLVDEYQDTNL
VQEAILQLVKKGSERTGNLFMVGDVKQSIYRFRLAEPMLFLDKYKRFAADGAAGGMRIDL
ARNFRSRAEVLDGTNFLFAQIMGETVGEMAYDEAAQLKYGADYPDGADTVPEVMIINRQR
AAEEEDEEAAELEGSELEARLMAEKIKEIVSRPFYVHDRSSGQPRRAMYRDIVVLVRSMT
NAPQMIEQLQAHGIPAAADLSSGYFQATEVSVMLSLLKVIDNPHQDIPLAAVLRSPLFRF
DENELAMIRLADPKGTFYEALQLFRQKPAETDEEEAAKKKAAAFLEQLGRWRTMARRRSL
ADLIWQLYRDTQFYDFVGALPGGKQRQANLRALYDRARQYESTAFRGLFRFLRFIERLQE
RGDDLGAARPLGEQEDVVRVMTIHSSKGLEFPVVFLAGLARPFYTRDLHHPYLLDKELGF
GARFVHPQLRISYPTLPLLAIQVKKRLELLAEEMRILYVALTRAKEKLYLLAAVNDADKE
IEKWKGVAGEREWLLPDDVRASARSYLDWIGRALIRHRDGRILAGEKAPDEIASHPSVWR
IAIVPAAELRSGEAAAGQADESMLAALEHGRPVPAGGGWKEEAERRLLWRYRYEKGTIVR
AKQSVSELKEQRVLFGELASEWPLRQGTVPIFSRPRFMQEKTLTPAEKGTALHIVMRHLD
LRAPVSEASIREQMGRLIEKELLSAEQAEAVDAAAIAAFFATDIGRRLCAAREVHREVPF
SLGLPASHLYGHDGMEDDRRVLVQGVIDCVFADERGYVMIDYKTDEVTGRFAGQKEEAAR
FLLGRYGTQMRLYRQAIEQIWRVPVAECYLYSFDGQYIIAVE
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgttgcgtttcgcccgaagccggccggaagccggtggacggatgaacagtggaaa
gccatcgtggccggcggccgggacgttctcgtcgctgcggcggccgggtctggaaaaacg
gccgttcttgttgagcgaatcatccaaaaagtaacggcggaagacgaggcgaccgatatt
gaccgccttcttgtcgtcacgtttacgaacgctgcggcggctgagatgaaagcaaggatc
ggcgaggcgctcgagcgcgaactcgccaagcggccgcattcgctccatttgcggcgccag
ctcagcctgctcaaccgcgcctcgatttcgacgctccattcgttttgcttagatgtcatc
cgcaaatattattatttgctcgatctggatccgtcgtttcgcatcgctgatgagacagaa
atcgaactgctgaaagaggacgtccttgaggagctgcttgaggaggaatatggaaaggcg
gataacgagcgcttttttgccgtcattgatgcttacaccggagaccggagcgatgccgag
ctgcaagacatgattttcgcgttgcatgacttctcccgctcccaccccgcgcccgatgaa
tggctgaaaggccttgtatccatgtatgaggtcgatgaacagacgccgcccgagtcgctt
ttgccatcgcgctatatcaaccaacatgcggcgatggagctggcagcggccaaacggctc
atcgaaagggcgttgcgtcttgcgcaggaaccgggcgggccgcggccgtatgagaaacgg
ctgcgcgaggatgccgccgttgtcgctgaacttgaaagatggcggtcgcaatcgtgggaa
ggactgtatcgtgctttgcagtcgctggcgttcggccggcttccgggctgtcgcggcgat
ggctatgacaagtggctcgtcgatgaggcgaaatcgcttcgcgaccaggcgaagaagaaa
ctggaagcgctgcgcgacaacatattttcgctgcccccgtctgtctggatccgccatatg
cgggagatgaagccggcggttgagacgatcgttgcgcttgtccgccgtttttccgctagg
tttcaagccgtgaaacgtgaaaaagggatcgtcgacttttctgatttggaacattattgt
ctgcatgttttgcggcagcgcgacccgaaaacgggcgaatggcagccatcggcggccgct
ttggagtaccaagcgcagtttgatgaagtgcttgtcgatgagtatcaagatacgaacctt
gtgcaagaagcgattttgcagctcgtcaaaaaaggaagcgagcggactggcaacttattt
atggtcggcgatgtcaagcagtcgatttatcgttttcgcctcgccgagccgatgctgttt
ttggacaaatacaaacggtttgccgctgatggggccgcagggggaatgagaattgatttg
gcgcgcaatttccgcagccgcgccgaggtgctggacggcacgaacttcctttttgcacaa
atcatgggggaaaccgttggggagatggcgtacgatgaagcagcccagcttaagtatggc
gccgattatccggatggggcggatactgttccggaagtgatgatcatcaaccggcagcgc
gcggcggaagaagaggacgaagaggcagcggagcttgagggctccgagctggaggcgcgc
ctaatggccgagaaaatcaaagaaatcgtgtcgcggccattttatgtgcatgaccgctca
agcgggcaaccgcggcgtgccatgtaccgagacatcgttgtgctcgtccgttcgatgacg
aacgccccgcaaatgatcgagcagctgcaggcgcacggcattccggcggctgccgattta
tcgtccggctactttcaggcgacggaagtttcggtgatgctgtcgcttctgaaagtcatt
gacaacccgcaccaagacattccgctcgccgctgtgctccgctcgccgctgtttcgcttt
gatgaaaacgagttggccatgatccgcctcgccgatccaaaaggaacgttttatgaggcg
cttcagttgttccggcaaaagccggcggaaacggatgaggaggaggccgccaagaaaaaa
gcggccgcgtttttggagcagctcgggcgctggcgcacgatggcccgccgccgctcgttg
gccgacctcatctggcagctgtatcgcgatacacaattttacgattttgtcggcgcgctg
ccgggtggaaagcaacggcaggccaatttgcgcgccttgtatgatcgcgcccgccaatac
gaatcgacggcctttcgcgggctgttccgctttctccgctttattgagcggctgcaggag
cgcggcgatgatttaggagcagcccggccgcttggtgagcaggaagatgtcgtgcgggtg
atgacgatccatagcagcaaagggctcgagtttccggtcgtctttctggccggactcgcc
cgcccgttttatacgcgggatttgcatcatccgtacttgctggataaagagctcggcttt
ggcgcccgttttgtccacccacagctgcgcatcagctatccaacgctgccattgctggcg
atccaagtgaaaaagcggctcgagctgctcgccgaggaaatgcgcattttgtacgttgcg
ctgacaagagcgaaagagaagctttatttgctcgccgcggtcaacgatgccgataaggag
atcgaaaaatggaaaggcgttgcgggagaacgcgaatggctgcttcccgacgatgtgcgg
gcatcggcccgttcctatttagactggatcggccgggcgctcattcgccaccgcgacggg
cgcattttagcgggagagaaggcgccggatgaaatcgcctcccatccgtccgtatggcgt
attgccattgtgcccgcggccgagctgcgcagcggcgaggcggctgccggccaggcggac
gagagcatgctcgctgcgcttgaacatggccgccctgttccggctggcggcggctggaaa
gaggaagcagagcggcgtttgttatggcggtatcgctatgaaaaagggacgattgtgcgc
gccaaacagtcggtgtcggagctgaaagagcaacgggtgctgtttggcgagctggcgagt
gaatggccgctgcgccaaggaacagtgccgattttctcgcggccgcgctttatgcaggaa
aaaacgttgacgccggcggaaaaaggaaccgcgcttcatatcgtcatgcgccatctcgac
ttgcgtgcgccggtcagtgaagcgtccatccgtgagcaaatgggtcggctcatcgaaaaa
gagctgttgtcggccgagcaagccgaagcggtcgatgcggccgcgatcgccgcctttttc
gctacggatatcggccgccgcctttgcgccgcccgcgaggtgcaccgggaagtgccattc
agtctagggcttccggcttcccatctttacgggcatgacgggatggaagacgaccgccgg
gtgcttgtccaaggggtgattgactgtgtgtttgcggatgagcgcggttatgtgatgatc
gactataaaacggatgaggtgaccggccgttttgccggccagaaagaggaggccgcccgc
tttttgctcggccgctacggaacgcaaatgcgcctgtatcggcaagcgattgagcaaatt
tggcgcgtgccggtagcggagtgctatttgtattcgtttgacggccaatacattatcgcg
gtggaatga
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